GTR Test Accession:
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GTR000569929.5
NYS CLEP
CAP
Last updated in GTR:
2023-06-26
View version history
GTR000569929.5,
last updated:
2023-06-26
GTR000569929.4,
last updated:
2023-05-04
GTR000569929.3,
last updated:
2022-09-27
GTR000569929.2,
last updated:
2022-07-26
GTR000569929.1,
registered in GTR:
2021-07-27
Last annual review date for the lab: 2024-04-05
LinkOut
At a Glance
Test purpose:
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Drug Response;
Therapeutic management
Conditions (2):
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Drug metabolism or response;
Susceptibility to severe cutaneous adverse reaction
Genes (25):
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Methods (2):
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Molecular Genetics - Deletion/duplication analysis: Quantitative PCR (qPCR); ...
Target population: Help
Not provided
Clinical validity:
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Not provided
Clinical utility:
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Not provided
Ordering Information
Offered by:
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Test short name:
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RM-COMP
Specimen Source:
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- Buccal swab
- Isolated DNA
- Peripheral (whole) blood
- View specimen requirements
Who can order: Help
- Health Care Provider
- Licensed Dentist
- Licensed Physician
- Nurse Practitioner
- Physician Assistant
- Registered Nurse
Test Order Code:
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RM-COMP
Lab contact:
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Marissa Rausch, MS, M(ASCP), Staff
marissarausch@oneome.com
marissarausch@oneome.com
Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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Authorized healthcare providers with a valid NPI number can order directly from www.oneome.com.
Order URL
Order URL
Test service:
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Clinical Testing/Confirmation of Mutations Identified Previously
OrderCode: RM-COMP
OrderCode: RM-COMP
Test development:
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Test developed by laboratory (no manufacturer test name)
Informed consent required:
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Based on applicable state law
Pre-test genetic counseling required:
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No
Post-test genetic counseling required:
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No
Recommended fields not provided:
Test strategy
Conditions
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Total conditions: 2
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 25
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 2
Method Category
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Test method
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Instrument
Deletion/duplication analysis
Quantitative PCR (qPCR)
Other
Targeted variant analysis
PCR with allele specific hybridization
Douglas Scientific IntelliQube qPCR platform
Clinical Information
Test purpose:
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Drug Response;
Therapeutic management
Variant Interpretation:
What is the protocol for interpreting a variation as a VUS?
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Only clinically actionable variants are included in the RightMed test and therefore there are no VUS. Novel haplotypes are confirmed with bi-directional sanger sequencing prior to reporting.
Only clinically actionable variants are included in the RightMed test and therefore there are no VUS. Novel haplotypes are confirmed with bi-directional sanger sequencing prior to reporting.
Are family members with defined clinical status recruited to assess significance of VUS without charge?
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No.
No.
Will the lab re-contact the ordering physician if variant interpretation changes?
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No. As a matter of practice, OneOme will routinely update its pharmacogenomic database as new information becomes available to the scientific community. As a result of these updates, drug binning and annotations found on the RightMed pharmacogenomic test report is dependent on the date of generation and/or the database version used … View more
No. As a matter of practice, OneOme will routinely update its pharmacogenomic database as new information becomes available to the scientific community. As a result of these updates, drug binning and annotations found on the RightMed pharmacogenomic test report is dependent on the date of generation and/or the database version used … View more
Recommended fields not provided:
Clinical validity,
Clinical utility,
Target population,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Test Procedure:
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SNP genotyping by real-time PCR and CYP2D6 copy number analysis by qPCR.
Test Confirmation:
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Novel alleles are confirmed by bi-directional Sanger sequencing or high-resolution typing (HLAs only).
Test Comments:
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The RightMed Gene Test interrogates the following variants: rs28371706 NM_000106.5:c.320C>T rs1065852 NM_000106.5:c.100C>T rs1135840 NM_000106.5:c.1457G>C rs16947 NM_000106.5:c.886C>T rs3892097 NM_000106.5:c.506-1G>A rs769258 NM_000106.5:c.31G>A rs5030862 NM_000106.5:c.124G>A rs201377835 NM_000106.5:c.181-1G>C rs5030867 NM_000106.5:c.971A>C hCV32407220 NM_000106.5:c.1411_1412insTGCCCACTG rs5030656 NM_000106.5:c.841_843delAAG rs35742686 NM_000106.5:c.775delA rs72549353 NM_000106.5:c.765_768delAACT rs5030655 NM_000106.5:c.454delT rs774671100 NM_000106.5:c.137_138insT rs1080985 NM_000106.5:c.-1584C>G rs59421388 NM_000106.5:c.1012G>A rs28371725 NM_000106.5:c.985+39G>A rs72549346 NM_000106.5:c.1088_1089insGT rs5030865 NM_000106.5:c.505G>[A,T] rs267608319 NM_000106.5:c.1319G>A …
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Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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The test does not detect all known and unknown variations in the gene(s) tested, nor does absence of a detectable variant (designated as *1 for genes encoding drug metabolizing enzymes) rule out the presence of other, non-detected variants. As with other common SNP genotyping techniques, these assays cannot differentiate between …
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Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
College of American Pathologists, CAP
Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
College of American Pathologists, CAP
VUS:
Software used to interpret novel variations
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N/A
Laboratory's policy on reporting novel variations Help
Only clinically actionable variants are included in the RightMed test.
N/A
Laboratory's policy on reporting novel variations Help
Only clinically actionable variants are included in the RightMed test.
Recommended fields not provided:
Assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Category:
FDA exercises enforcement discretion
NYS CLEP Approval:
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Number:
9226
Status: Approved
Status: Approved
Additional Information
Reviews:
Clinical resources:
Consumer resources:
IMPORTANT NOTE:
NIH does not independently verify information submitted to GTR; it relies on submitters to provide information that is accurate and not misleading.
NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.