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ERX004007: Neandertal Amino Acid Capture project
5 ILLUMINA (Illumina Genome Analyzer II) runs: 70.8M spots, 7.2G bases, 12.1Gb downloads

Design: Illumina paired-end sequencing of MMS1_MMS2 library
Submitted by: Max Planck Institute for Evolutionary Anthropology (MPI-EVA)
Study: Neandertal Amino Acid Capture project
PRJEB2071 • ERP000125 • All experiments • All runs
show Abstracthide Abstract
Timing of human protein evolution as revealed by massively parallel capture of Neandertal nuclear DNA sequences
Sample: unknown_human_sequence
SAMEA848599 • ERS007301 • All experiments • All runs
Organism: unclassified sequences
Library:
Name: MMS1_MMS2
Instrument: Illumina Genome Analyzer II
Strategy: WGS
Source: GENOMIC
Selection: other
Layout: PAIRED
Construction protocol: Illumina multiplex library construction protocol.
Spot descriptor:
1  forward index109  reverse

Experiment attributes: (show all 52 attributes...) (hide...)
expected_basecall:read_group_tag=key2:min_match=3:max_mismatch=0:match_edge=full: GAC
expected_basecall:read_group_tag=ACAGTG:min_match=6:max_mismatch=1:match_edge=full: ACAGTGA
expected_basecall:read_group_tag=GATCAG:min_match=6:max_mismatch=1:match_edge=full: GATCAGA
expected_basecall:read_group_tag=ATCACG:min_match=6:max_mismatch=1:match_edge=full: ATCACGA
expected_basecall:read_group_tag=CGATGT:min_match=6:max_mismatch=1:match_edge=full: CGATGTA
expected_basecall:read_group_tag=CTTGTA:min_match=6:max_mismatch=1:match_edge=full: CTTGTAA
expected_basecall:read_group_tag=GGCTAC:min_match=6:max_mismatch=1:match_edge=full: GGCTACA
expected_basecall:read_group_tag=TGACCA:min_match=6:max_mismatch=1:match_edge=full: TGACCAA
expected_basecall:read_group_tag=AAAGCA:min_match=6:max_mismatch=1:match_edge=full: AAAGCAA
expected_basecall:read_group_tag=AAATGC:min_match=6:max_mismatch=1:match_edge=full: AAATGCA
expected_basecall:read_group_tag=AAGCGA:min_match=6:max_mismatch=1:match_edge=full: AAGCGAA
expected_basecall:read_group_tag=AAGGAC:min_match=6:max_mismatch=1:match_edge=full: AAGGACA
expected_basecall:read_group_tag=AATAGG:min_match=6:max_mismatch=1:match_edge=full: AATAGGA
expected_basecall:read_group_tag=ACCCAG:min_match=6:max_mismatch=1:match_edge=full: ACCCAGA
expected_basecall:read_group_tag=ACTCTC:min_match=6:max_mismatch=1:match_edge=full: ACTCTCA
expected_basecall:read_group_tag=AGAAGA:min_match=6:max_mismatch=1:match_edge=full: AGAAGAA
expected_basecall:read_group_tag=AGCATC:min_match=6:max_mismatch=1:match_edge=full: AGCATCA
expected_basecall:read_group_tag=AGGCCG:min_match=6:max_mismatch=1:match_edge=full: AGGCCGA
expected_basecall:read_group_tag=ATACGG:min_match=6:max_mismatch=1:match_edge=full: ATACGGA
expected_basecall:read_group_tag=ATCCTA:min_match=6:max_mismatch=1:match_edge=full: ATCCTAA
expected_basecall:read_group_tag=ATCTAT:min_match=6:max_mismatch=1:match_edge=full: ATCTATA
expected_basecall:read_group_tag=ATGAGC:min_match=6:max_mismatch=1:match_edge=full: ATGAGCA
expected_basecall:read_group_tag=CATTTT:min_match=6:max_mismatch=1:match_edge=full: CATTTTA
expected_basecall:read_group_tag=CCGCAA:min_match=6:max_mismatch=1:match_edge=full: CCGCAAA
expected_basecall:read_group_tag=CTCAGA:min_match=6:max_mismatch=1:match_edge=full: CTCAGAA
expected_basecall:read_group_tag=GAATAA:min_match=6:max_mismatch=1:match_edge=full: GAATAAA
expected_basecall:read_group_tag=GCCGCG:min_match=6:max_mismatch=1:match_edge=full: GCCGCGA
expected_basecall:read_group_tag=GCTCCA:min_match=6:max_mismatch=1:match_edge=full: GCTCCAA
expected_basecall:read_group_tag=GGCACA:min_match=6:max_mismatch=1:match_edge=full: GGCACAA
expected_basecall:read_group_tag=GGCCTG:min_match=6:max_mismatch=1:match_edge=full: GGCCTGA
expected_basecall:read_group_tag=TCGGCA:min_match=6:max_mismatch=1:match_edge=full: TCGGCAA
expected_basecall:read_group_tag=TCTACC:min_match=6:max_mismatch=1:match_edge=full: TCTACCA
expected_basecall:read_group_tag=TGCCAT:min_match=6:max_mismatch=1:match_edge=full: TGCCATA
expected_basecall:read_group_tag=TGCTGG:min_match=6:max_mismatch=1:match_edge=full: TGCTGGA
expected_basecall:read_group_tag=AGGTTT:min_match=6:max_mismatch=1:match_edge=full: AGGTTTA
expected_basecall:read_group_tag=AGTCAA:min_match=6:max_mismatch=1:match_edge=full: AGTCAAA
expected_basecall:read_group_tag=AGTTCC:min_match=6:max_mismatch=1:match_edge=full: AGTTCCA
expected_basecall:read_group_tag=ATGTCA:min_match=6:max_mismatch=1:match_edge=full: ATGTCAA
expected_basecall:read_group_tag=CCGTCC:min_match=6:max_mismatch=1:match_edge=full: CCGTCCA
expected_basecall:read_group_tag=GTAGAG:min_match=6:max_mismatch=1:match_edge=full: GTAGAGA
expected_basecall:read_group_tag=GTGAAA:min_match=6:max_mismatch=1:match_edge=full: GTGAAAA
expected_basecall:read_group_tag=GTGGCC:min_match=6:max_mismatch=1:match_edge=full: GTGGCCA
expected_basecall:read_group_tag=GTTTCG:min_match=6:max_mismatch=1:match_edge=full: GTTTCGA
expected_basecall:read_group_tag=CGTACG:min_match=6:max_mismatch=1:match_edge=full: CGTACGA
expected_basecall:read_group_tag=GAGTGG:min_match=6:max_mismatch=1:match_edge=full: GAGTGGA
expected_basecall:read_group_tag=GGTAGC:min_match=6:max_mismatch=1:match_edge=full: GGTAGCA
expected_basecall:read_group_tag=ACTTGA:min_match=6:max_mismatch=1:match_edge=full: ACTTGAA
expected_basecall:read_group_tag=CAGATC:min_match=6:max_mismatch=1:match_edge=full: CAGATCA
expected_basecall:read_group_tag=GCCAAT:min_match=6:max_mismatch=1:match_edge=full: GCCAATA
expected_basecall:read_group_tag=TAGCTT:min_match=6:max_mismatch=1:match_edge=full: TAGCTTA
expected_basecall:read_group_tag=TTAGGC:min_match=6:max_mismatch=1:match_edge=full: TTAGGCA
center_name: MPI-EVA
Runs: 5 runs, 70.8M spots, 7.2G bases, 12.1Gb
Run# of Spots# of BasesSizePublished
ERR01102814,970,6651.5G2.6Gb2011-03-18
ERR01102914,999,0671.5G2.6Gb2011-03-18
ERR01103014,731,1731.5G2.5Gb2011-03-18
ERR01103112,923,0031.3G2.2Gb2011-03-18
ERR01103213,183,9791.3G2.2Gb2011-03-18

ID:
36369

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