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ERX3216855: Illumina HiSeq 2000 sequencing; Variation and genetic control of chromatin architecture in humans (ChIPseq)
1 ILLUMINA (Illumina HiSeq 2000) run: 15.1M spots, 545.2M bases, 245.3Mb downloads

Design: Variation and genetic control of chromatin architecture in humans (ChIPseq)
Submitted by: UNIGE
Study: Variation and genetic control of chromatin architecture in humans (ChIPseq)
show Abstracthide Abstract
This data set comprises population (47 samples) measurements of transcription factor DNA binding (PU.1 and RPB2) and histone modification (H3K27ac, H3K4me1 and H3k4me3) levels for a subset of the 1000 Genomes Project CEPH samples. This data was generated as part of the following study: - Population Variation and Genetic Control of Modular Chromatin Architecture in Humans. Cell. 2015 Aug 27;162(5):1039-50. doi: 10.1016/j.cell.2015.08.001. Epub 2015 Aug 20. An additional set of 111 samples from the 1000 Genomes Project (GBR and TSI populations) were also assayed for three histone modifications (H3K27ac, H3K4me1 and H3k4me3). This data was generated as part of the following study: - Chromatin 3D interactions mediate genetic effects on regulatory networks.
Sample: HG00265_H3K4me3
SAMEA5391522 • ERS3197883 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: HG00265_H3K4me3_s
Instrument: Illumina HiSeq 2000
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol: CEPH samples from 1000 Genomes TruSeq ChIPseq Sample Preparation
Experiment attributes:
Experimental Factor: immunoprecipitate: H3K4me3
Experimental Factor: coriell id: HG00265
Runs: 1 run, 15.1M spots, 545.2M bases, 245.3Mb
Run# of Spots# of BasesSizePublished
ERR318907515,145,483545.2M245.3Mb2019-03-21

ID:
7487754

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