GSM4412044[Accession] - GEO DataSets

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Items: 4

Select item 2001470041.

DNA Methylation Study of Huntington's Disease and Motor Progression in Three Species

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Ovis aries; Rattus norvegicus; Homo sapiens; Mus musculus

Type:: Methylation profiling by genome tiling array; Methylation profiling by high throughput sequencing

Platforms:: GPL28271 GPL13534 GPL11002
348 Samples

Download data: BED, IDAT, TXT

Series

Accession:: GSE147004

ID:: 200147004

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2001470032.

DNA methylation profiles from a transgenic sheep model of Huntington's disease

(Submitter supplied) An Infinium microarray platform (HorvathMammalMethylChip40) was used to generate DNA methylation data from n=168 blood samples of a transgenic sheep model of Huntington's disease. 84 transgenic sheep and age matched control sheep.

Organism:: Mus musculus; Ovis aries; Rattus norvegicus; Homo sapiens

Type:: Methylation profiling by genome tiling array

Platform:: GPL28271
168 Samples

Download data: IDAT

Series

Accession:: GSE147003

ID:: 200147003

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000282713.

Illumina HorvathMammalianMethylChip40 BeadChip

(Submitter supplied) Developed in the labs of Steve Horvath and Jason Ernst. The mammalian array platform applies to ALL mammals (humans, mouse, rat, sheep, horses, pigs, etc.). The array design is similar to the Illumina Infinium 450K array but it contains fewer up to 37492 CpGs. Additional material can be found on the Github page https://github.com/shorvath/MammalianMethylationConsortium/ A vignette on using the mammal methylation array with SeSAMe is available from https://bioconductor.org/packages/release/bioc/vignettes/sesame/inst/doc/mammal.html. more...