GEO DataSets

(Submitter supplied) An Infinium microarray platform (GPL28271, Horvath MammalMethylChip40) was used to generate DNA methylation data from skin samples of Hector's and Māui dolphins.

Organism:

Mus musculus; Homo sapiens; Rattus norvegicus; Cephalorhynchus hectori hectori; Cephalorhynchus hectori maui

Type:

Methylation profiling by genome tiling array

Platform:

GPL28271

141 Samples

Download data: IDAT

(Submitter supplied) An Infinium microarray platform (GPL28271, HorvathMammalMethylChip40) was used to generate DNA methylation data from skin samples of beluga whales, Maui's dolphin, and humpback whale. Tissue: Skin

Organism:

Homo sapiens; Physeter catodon; Delphinapterus leucas; Mus musculus; Rattus norvegicus; Cephalorhynchus hectori maui; Balaenoptera musculus; Megaptera novaeangliae

Type:

Methylation profiling by genome tiling array

Platform:

GPL28271

143 Samples

Download data: IDAT

(Submitter supplied) Cytosine methylation data generated on mammalian methylation platform

Organism:

Homo sapiens; Mus musculus; Rattus norvegicus; Orcinus orca

Type:

Methylation profiling by array

Platform:

GPL28271

140 Samples

Download data: CSV, IDAT

(Submitter supplied) Cytosine methylation data generated on mammalian methylation platform

Organism:

Rattus norvegicus; Balaena mysticetus; Homo sapiens; Mus musculus

Type:

Methylation profiling by array

Platform:

GPL28271

105 Samples

Download data: CSV, IDAT

(Submitter supplied) An Infinium microarray platform (GPL28271, HorvathMammalMethylChip40) was used to generate DNA methylation data from several tissues (skin, blood) in toothed whales and dolphins. Tissues: skin and blood.

Organism:

Delphinapterus leucas; Mus musculus; Rattus norvegicus; Lagenorhynchus obliquidens; Homo sapiens; Phocoena phocoena; Orcinus orca; Tursiops truncatus; Globicephala macrorhynchus; Steno bredanensis; Delphinus delphis; Cephalorhynchus commersonii

Type:

Methylation profiling by genome tiling array

Platform:

GPL28271

545 Samples

Download data: IDAT, TXT

(Submitter supplied) Cytosine methylation data generated on mammalian methylation platform

Organism:

Zalophus californianus; Phoca vitulina; Rattus norvegicus; Eumetopias jubatus; Neophoca cinerea; Homo sapiens; Mus musculus; Odobenus rosmarus divergens; Phoca groenlandica

Type:

Methylation profiling by array

Platform:

GPL28271

171 Samples

Download data: CSV, IDAT

(Submitter supplied) Background: DNA methylation is influenced by both environmental and genetic factors and is increasingly thought to affect variation in complex traits and diseases. Yet, the extent of ancestry-related differences in DNA methylation, its genetic determinants, and their respective causal impact on immune gene regulation remain elusive. Results: We report extensive population differences in DNA methylation between 156 individuals of African and Europeandescent —detected in primary monocytes that were used as a model of a major innate immunity cell type. more...

Organism:

Homo sapiens

Type:

Methylation profiling by array

Platform:

GPL23976

156 Samples

Download data: CSV

(Submitter supplied) Genome wide DNA methylation profiling of normal colon samples. The Illumina Infinium HumanMethylation450 and EPIC Beadchip arrays were used to obtain DNA methylation profiles across approximately 450,000 and 850,000 CpGs. Samples were from nomal colons of 334 subjects with low, medium or high CRC risk according to their personal adenoma or cancer history.

Organism:

Homo sapiens

Type:

Methylation profiling by genome tiling array

Platforms:

GPL21145 GPL13534

334 Samples

Download data: IDAT