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Series GSE164465 Query DataSets for GSE164465
Status Public on Jun 16, 2022
Title Genome Methylation in Wild Beluga Whales
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus
Sample organisms Delphinapterus leucas; Physeter catodon; Balaenoptera musculus; Megaptera novaeangliae; Cephalorhynchus hectori maui
Experiment type Methylation profiling by genome tiling array
Summary An Infinium microarray platform (GPL28271, HorvathMammalMethylChip40) was used to generate DNA methylation data from skin samples of beluga whales, Maui's dolphin, and humpback whale.
Tissue: Skin
 
Overall design N=143 skin samples. Mainly from beluga but also Maui dolphin and 1 humpback whale. Profiled on the mammalian methylation array platform (GPL28271). The characteristic variable CanBeUsedForAgingStudies.
 
Contributor(s) Horvath S, Bors E, Baker S
Citation(s) 34025766
Submission date Jan 08, 2021
Last update date Jun 17, 2022
Contact name Steve Horvath
E-mail(s) shorvath@altoslabs.com
Organization name University of California, Los Angeles
Department Human Genetics
Lab Horvath
Street address 695 Charles E. Young Drive South, Box 708822
City Los Angeles
State/province CA
ZIP/Postal code 90095-7088
Country USA
 
Platforms (1)
GPL28271 Illumina HorvathMammalianMethylChip40 BeadChip
Samples (143)
GSM5011411 Sample.1.Beluga whale.202894750042_R01C01
GSM5011412 Sample.2.Beluga whale.202894750042_R02C01
GSM5011413 Sample.3.Beluga whale.202894750042_R03C01
Relations
BioProject PRJNA690815

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164465_RAW.tar 106.3 Mb (http)(custom) TAR (of IDAT)
Processed data included within Sample table
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