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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001282179.3 → NP_001269108.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform a
See identical proteins and their annotated locations for NP_001269108.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice junction in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same isoform (a).
- Source sequence(s)
-
AA782601, AB209811, AL118555, AL136038, AW134792, CB989123, CK820060, L76703
- Consensus CDS
-
CCDS9758.1
- UniProtKB/Swiss-Prot
- A4FU37, B7ZAW5, B7ZKK8, B7ZKK9, J3KQN6, Q16537, Q52LW4
- UniProtKB/TrEMBL
- B5BTZ7, Q562F2
- Conserved Domains (2) summary
-
- pfam01603
Location:55 → 435
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
- cl27532
Location:2 → 67
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
-
NM_001282180.3 → NP_001269109.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform b
See identical proteins and their annotated locations for NP_001269109.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame splice junction at an end of a 3' exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AA782601, AK299520, AL118555, AL132992, AL136038, AW134792, CB989123, CK820060, L76703
- Consensus CDS
-
CCDS61468.1
- UniProtKB/TrEMBL
-
B7Z5X1
- Related
- ENSP00000452396.1, ENST00000555899.1
- Conserved Domains (2) summary
-
- pfam01603
Location:55 → 430
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
- cl27532
Location:2 → 67
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
-
NM_001282181.3 → NP_001269110.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform c
See identical proteins and their annotated locations for NP_001269110.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (c) has a shorter N-terminus compared to isoform a. Variants 4 and 5 both encode the same isoform (c).
- Source sequence(s)
-
AA782601, AK301796, AL118555, AW134792, BC093766, CK820060, L76703
- Consensus CDS
-
CCDS61467.1
- UniProtKB/TrEMBL
-
B7Z7C0
- Related
- ENSP00000404632.2, ENST00000422769.6
- Conserved Domains (1) summary
-
- pfam01603
Location:2 → 359
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
-
NM_001282182.3 → NP_001269111.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform c
See identical proteins and their annotated locations for NP_001269111.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (c) has a shorter N-terminus compared to isoform a. Variants 4 and 5 both encode the same isoform (c).
- Source sequence(s)
-
AA782601, AK301796, AK316430, AL118555, AW134792, BC093766, CK820060, L76703
- Consensus CDS
-
CCDS61467.1
- UniProtKB/TrEMBL
-
B7Z7C0
- Conserved Domains (1) summary
-
- pfam01603
Location:2 → 359
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
-
NM_001354926.2 → NP_001341855.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform d
Status: REVIEWED
- Source sequence(s)
-
AL132992, AL136038, BC056156
- Related
-
ENST00000556878.1
- Conserved Domains (1) summary
-
- cl27532
Location:55 → 120
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
-
NM_006246.5 → NP_006237.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform a
See identical proteins and their annotated locations for NP_006237.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a). Variants 1 and 2 both encode the same isoform (a).
- Source sequence(s)
-
AA782601, AL118555, AL136038, AW134792, BC093766, CB989123, CK820060, L76703
- Consensus CDS
-
CCDS9758.1
- UniProtKB/Swiss-Prot
- A4FU37, B7ZAW5, B7ZKK8, B7ZKK9, J3KQN6, Q16537, Q52LW4
- UniProtKB/TrEMBL
- B5BTZ7, Q562F2
- Related
- ENSP00000337641.3, ENST00000337537.8
- Conserved Domains (2) summary
-
- pfam01603
Location:55 → 435
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
- cl27532
Location:2 → 67
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
RNA
-
NR_104104.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks an alternate internal exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA782601, AL118555, AL136038, AW134792, BC013154, CB989123, CK820060, L76703
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
63371364..63543377 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047431543.1 → XP_047287499.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X2
- UniProtKB/TrEMBL
-
B7Z5X1
-
XM_024449647.2 → XP_024305415.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1
- UniProtKB/Swiss-Prot
- A4FU37, B7ZAW5, B7ZKK8, B7ZKK9, J3KQN6, Q16537, Q52LW4
- UniProtKB/TrEMBL
- B5BTZ7, Q562F2
- Conserved Domains (2) summary
-
- pfam01603
Location:55 → 435
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
- cl27532
Location:2 → 67
- B56; Protein phosphatase 2A regulatory B subunit (B56 family)
-
XM_047431544.1 → XP_047287500.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X3
- UniProtKB/TrEMBL
-
B7Z7C0
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
57578735..57750775 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054376319.1 → XP_054232294.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X2
- UniProtKB/TrEMBL
-
B7Z5X1
-
XM_054376318.1 → XP_054232293.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1
- UniProtKB/Swiss-Prot
- A4FU37, B7ZAW5, B7ZKK8, B7ZKK9, J3KQN6, Q16537, Q52LW4
- UniProtKB/TrEMBL
- B5BTZ7, Q562F2