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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_053118.2 RefSeqGene
- Range
-
5002..239330
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001349655.2 → NP_001336584.1 progesterone-induced-blocking factor 1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AL354720, AL391384
- UniProtKB/TrEMBL
-
A0A087WUI6
- Conserved Domains (1) summary
-
- cl25732
Location:81 → 721
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_006346.4 → NP_006337.2 progesterone-induced-blocking factor 1 isoform 2
See identical proteins and their annotated locations for NP_006337.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AL354720, AL391384
- Consensus CDS
-
CCDS31991.1
- UniProtKB/Swiss-Prot
- O95664, Q6U9V2, Q6UG50, Q86V07, Q8WXW3, Q96SF4
- UniProtKB/TrEMBL
-
A0A087WUI6
- Related
- ENSP00000317144.6, ENST00000326291.11
- Conserved Domains (3) summary
-
- COG0497
Location:468 → 698
- RecN; DNA repair ATPase RecN [Replication, recombination and repair]
- TIGR02168
Location:208 → 538
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR02169
Location:32 → 355
- SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
RNA
-
NR_146205.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site and lacks an exon compared to variant 1.
- Source sequence(s)
-
AL354720, AL391384
-
NR_146206.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate splice site and lacks two exons compared to variant 1.
- Source sequence(s)
-
AL354720, AL391384
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000013.11 Reference GRCh38.p14 Primary Assembly
- Range
-
72782133..73016461
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011534882.4 → XP_011533184.1 progesterone-induced-blocking factor 1 isoform X1
- UniProtKB/TrEMBL
-
A0A087WUI6
- Conserved Domains (2) summary
-
- TIGR02168
Location:208 → 567
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR02169
Location:32 → 355
- SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
-
XM_024449314.2 → XP_024305082.1 progesterone-induced-blocking factor 1 isoform X3
- UniProtKB/TrEMBL
-
A0A087WUI6
- Conserved Domains (1) summary
-
- cl25732
Location:208 → 538
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_011534885.4 → XP_011533187.1 progesterone-induced-blocking factor 1 isoform X5
- Conserved Domains (1) summary
-
- TIGR02168
Location:85 → 444
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_047430045.1 → XP_047286001.1 progesterone-induced-blocking factor 1 isoform X2
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XM_047430047.1 → XP_047286003.1 progesterone-induced-blocking factor 1 isoform X6
- Related
- ENSP00000478697.1, ENST00000617689.4
-
XM_047430046.1 → XP_047286002.1 progesterone-induced-blocking factor 1 isoform X4
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XM_047430048.1 → XP_047286004.1 progesterone-induced-blocking factor 1 isoform X8
-
XM_011534884.4 → XP_011533186.1 progesterone-induced-blocking factor 1 isoform X7
- UniProtKB/TrEMBL
-
A0A087WUI6
- Conserved Domains (2) summary
-
- TIGR02168
Location:208 → 567
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR02169
Location:32 → 355
- SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
-
XM_047430049.1 → XP_047286005.1 progesterone-induced-blocking factor 1 isoform X9
-
XM_017020351.2 → XP_016875840.1 progesterone-induced-blocking factor 1 isoform X10
-
XM_011534886.4 → XP_011533188.1 progesterone-induced-blocking factor 1 isoform X11
- UniProtKB/TrEMBL
-
Q05DN0
- Conserved Domains (1) summary
-
- COG1196
Location:36 → 357
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
XM_047430050.1 → XP_047286006.1 progesterone-induced-blocking factor 1 isoform X12
Alternate T2T-CHM13v2.0
Genomic
-
NC_060937.1 Alternate T2T-CHM13v2.0
- Range
-
72003616..72238006
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054374017.1 → XP_054229992.1 progesterone-induced-blocking factor 1 isoform X1
-
XM_054374019.1 → XP_054229994.1 progesterone-induced-blocking factor 1 isoform X3
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XM_054374021.1 → XP_054229996.1 progesterone-induced-blocking factor 1 isoform X5
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XM_054374018.1 → XP_054229993.1 progesterone-induced-blocking factor 1 isoform X2
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XM_054374022.1 → XP_054229997.1 progesterone-induced-blocking factor 1 isoform X6
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XM_054374020.1 → XP_054229995.1 progesterone-induced-blocking factor 1 isoform X4
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XM_054374024.1 → XP_054229999.1 progesterone-induced-blocking factor 1 isoform X8
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XM_054374023.1 → XP_054229998.1 progesterone-induced-blocking factor 1 isoform X7
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XM_054374025.1 → XP_054230000.1 progesterone-induced-blocking factor 1 isoform X9
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XM_054374026.1 → XP_054230001.1 progesterone-induced-blocking factor 1 isoform X10
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XM_054374028.1 → XP_054230003.1 progesterone-induced-blocking factor 1 isoform X12
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XM_054374027.1 → XP_054230002.1 progesterone-induced-blocking factor 1 isoform X11