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Platform GPL11020 Query DataSets for GPL11020
Status Public on Oct 05, 2012
Title NIBB Xenopus laevis 4.6K
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Xenopus laevis
Manufacturer Division of Morphogenesis, National Institute for Basic Biology, Nishigonaka, Myodaiji, Okazaki, Aichi 444-8585, Japan.
Manufacture protocol Microarray slide was prepared using the tentatively selected non-redundant 4608 cDNA set from the NIBB Xenopus EST cDNA library. The sequence information of arrayed cDNAs is available at both the XDB website (http://xenopus.nibb.ac.jp) and the GenBank.
 
 
Submission date Oct 06, 2010
Last update date Oct 05, 2012
Contact name Atsushi Suzuki
Organization name Hiroshima University
Department Graduate School of Science
Lab Institute for Amphibian Biology
Street address Kagamiyama 1-3-1
City Higashi-hiroshima
State/province Hiroshima
ZIP/Postal code 739-8526
Country Japan
 
Samples (2) GSM605600, GSM605601
Series (1)
GSE24562 Identification of genes regulated by XOct-25 overexpression in Xenopus ectoderm

Data table header descriptions
ID
CLONE_NAME NIBB EST library XDB3 accession number deposited in GenBank
DESCRIPTION Gene annotation
CLONE_ID
SPOT_ID

Data table
ID CLONE_NAME DESCRIPTION CLONE_ID SPOT_ID
RA025a01 XL001a06 lysyl oxidase [Xenopus laevis] emb|CAI72575.1| lysyl oxidase [Xenopus laevis] gb|AAI30091.1| Lox protein [Xenopus laevis XL001a06
RA025b01 XL019m11 "fructose-1,6-bisphosphatase 1 [Xenopus (Silurana) tropicalis] gb|AAH61270.1| Fructose-1,6-bisphosphatase [Xenopus (Silur" XL019m11
RA025c01 XL001c13 hypothetical protein LOC734658 [Xenopus laevis] gb|AAH99057.1| MGC115694 protein [Xenopus laevis] XL001c13
RA025d01 XL019m16 hypothetical protein LOC100049769 precursor [Xenopus laevis] sp|A5D8P8.1|INM02_XENLA RecName: Full=UPF0510 protein INM02 XL019m16
RA025e01 XL001c18 PREDICTED: similar to E3 ubiquitin-protein ligase NEDD4 [Taeniopygia guttata] XL001c18
RA025f01 XL019n12 empty spiracles homeobox 2 [Xenopus laevis] gb|AAH74130.1| MGC81839 protein [Xenopus laevis] XL019n12
RA025g01 XL001f15 complement factor properdin [Xenopus laevis] gb|AAH77925.1| MGC80861 protein [Xenopus laevis] XL001f15
RA025h01 XL020a15 "solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Xenopus laevis] gb|AAH75138.1| MGC81935" XL020a15
RA025I01 XL001h18 RecName: Full=E3 ubiquitin-protein ligase MARCH8; AltName: Full=Membrane-associated RING finger protein 8; AltName: Full XL001h18
RA025j01 XL020a20 "family with sequence similarity 3, member A [Xenopus laevis] gb|AAH43826.1| Fam3a-prov protein [Xenopus laevis]" XL020a20
RA025k01 XL001n14 importin 11 [Xenopus laevis] gb|AAH68908.1| MGC83107 protein [Xenopus laevis] XL001n14
RA025l01 XL020c07 "DnaJ (Hsp40) homolog, subfamily C, member 28 [Xenopus laevis] gb|AAH99284.1| MGC116476 protein [Xenopus laevis]" XL020c07
RA025m01 XL003a14 "39S ribosomal protein L52, mitochondrial precursor [Xenopus laevis] sp|Q4V7Q1.1|RM52_XENLA RecName: Full=39S ribosomal p" XL003a14
RA025n01 XL020c17 unnamed protein product [Tetraodon nigroviridis] XL020c17
RA025o01 XL003b20 mediator of RNA polymerase II transcription subunit 10 [Xenopus laevis] sp|Q6IP67.1|MED10_XENLA RecName: Full=Mediator o XL003b20
RA025p01 XL020c18 hypothetical protein PANDA_005462 [Ailuropoda melanoleuca] XL020c18
RA025a13 XL006g14 "PREDICTED: similar to ankyrin repeat domain 13B, [Monodelphis domestica]" XL006g14
RA025b13 XL023p14 PREDICTED: similar to KIAA1713 protein [Gallus gallus] XL023p14
RA025c13 XL006k19 hypothetical protein LOC495510 [Xenopus laevis] gb|AAH85209.1| LOC495510 protein [Xenopus laevis] XL006k19
RA025d13 XL024a11 Hypothetical protein LOC100127297 [Xenopus laevis] gb|AAI70218.1| Hypothetical protein LOC100127297 [Xenopus laevis] XL024a11

Total number of rows: 4608

Table truncated, full table size 487 Kbytes.




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