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Platform GPL15409 Query DataSets for GPL15409
Status Public on Apr 04, 2012
Title Mouse 4K miRNA LC_MRA-1002_miRMouse_14 [miRNA_ID version]
Technology type in situ oligonucleotide
Distribution commercial
Organism Mus musculus
Manufacturer LC Sciences
Manufacture protocol Arrays are made based µParaflo microfluidic technology (Atactic Technologies). On the µParaflo microfluidic chip, each detection probe consists of a chemically modified nucleotide coding segment complementary to target microRNA (from miRBase, http://microrna.sanger.ac.uk/sequences/) or other RNA (control or customer defined sequences) and a spacer segment of polyethylene glycol to extend the coding segment away from the substrate. The detection probes are made by in situ synthesis using PGR (photogenerated reagent) chemistry.
Catalog number MA1002
Support silicon
 
Description miRNA ID version of GPL9341
Mouse miRNA microarray with 100% coverage of mature miRNAs listed in miRBase version 14
 
Web link http://www.LCsciences.com
Contributor(s) Eicken C
Submission date Apr 04, 2012
Last update date Apr 04, 2012
Contact name Christoph Eicken
E-mail(s) ceicken@lcsciences.com
Phone +1 (713) 664-7087
Organization name LC Sciences, LLC
Street address 2575 W. Bellfort
City Houston
State/province TX
ZIP/Postal code 77054
Country USA
 
Samples (6) GSM909409, GSM909410, GSM909411, GSM909412, GSM1181829, GSM1181830
Series (2)
GSE37054 MicroRNA regulations during differentiation of mouse mammary stem cell-like cells
GSE48583 The Pitx2:miR-200c/141:noggin pathway regulates BMP signaling and ameloblast differentiation
Relations
Alternative to GPL9341

Data table header descriptions
ID Reporter Name - Name of the probe on the chip
Reporter BioSequence Database Entry[mirna] miRBase accession code of the targeted miRNA of the probe on the chip
Reporter BioSequence Type BioSequence type of the probe on the chip
Reporter BioSequence Polymer Type BioSequence polymer type of the probe on the chip
Reporter Group [role] General function of the particular probe on the chip: experimental / control
Reporter Control Type Specific function of the particular probe on the chip
Reporter Comment Target sequence (5' to 3') of the probe
miRNA_ID
SPOT_ID

Data table
ID Reporter BioSequence Database Entry[mirna] Reporter BioSequence Type Reporter BioSequence Polymer Type Reporter Group [role] Reporter Control Type Reporter Comment miRNA_ID SPOT_ID
BKG0 Control control_empty --control_empty
Ctr01-3M05 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr01-3M10 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr01-3P ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr02-3M05 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr02-3M10 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr02-3P ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr03-3M05 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr03-3M10 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr03-3P ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr04-3M05 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr04-3M10 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr04-3P ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr05-3M05 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr05-3M10 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr05-3P ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr06-3M05 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr06-3M10 ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr06-3P ss_oligo DNA Control control_spike_calibration --control_spike_calibration
Ctr07-3M05 ss_oligo DNA Control control_spike_calibration --control_spike_calibration

Total number of rows: 750

Table truncated, full table size 80 Kbytes.




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Supplementary data files not provided
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