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Status
Public on Mar 31, 2015
Title
Oxford Gene Technology 4x44K S. Typhimurium SL1344 60-mer oligonucleotide array
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 Manufacturer
Oxford Gene Technology
Manufacture protocol
The oligonucleotide array is made up of 4 X 44K 60 mer oligonucleotides printed onto glass slides
Description
Design ID 019399
Contributor(s)
Thompson A Submission date
Nov 28, 2014
Last update date
Mar 31, 2015
Contact name
Arthur Thompson
E-mail(s)
arthur.thompson@ifr.ac.uk Phone
01603 255181
Organization name
Institute of Food Research
Street address
Colney Lane
City
Norwich
ZIP/Postal code
NR4 7UA
Country
United Kingdom
Samples (36)
GSM1556038 , GSM1556039 , GSM1556040 , GSM1556041 , GSM1556042 , GSM1556043
GSM1556044 ,
GSM1556045 ,
GSM1556046 ,
GSM1556047 ,
GSM1556048 ,
GSM1556049 ,
GSM1556050 ,
GSM1556051 ,
GSM1556052 ,
GSM1556053 ,
GSM1556054 ,
GSM1556055 ,
GSM1556056 ,
GSM1556057 ,
GSM1556058 ,
GSM1556059 ,
GSM1556060 ,
GSM1556061 ,
GSM1556062 ,
GSM1556063 ,
GSM1556064 ,
GSM1556065 ,
GSM1556066 ,
GSM1556067 ,
GSM1556068 ,
GSM1556069 ,
GSM1556070 ,
GSM1556073 ,
GSM1556074 ,
GSM1556075 Series (2)
GSE63711 RNA polymerase binding sites revealed by ChIP-chip in S. Typhimurium wild-type, ΔrelAΔspoT (ppGpp0), and ΔdksA strains at early stationary phase (ESP) and late stationary phase (LSP)
GSE63715 Transcriptional profiles of Salmonella Typhimurium 4/74 parent and relA spoT, rpoS and dksA strains during stationary phase, and RNA polymerase distribution as determined by chromatin immunoprecipitation in parent, relA spoT and dksA strains
Data table header descriptions ID Genomic location Probe type GB_ACC RANGE_START RANGE_END SEQUENCE 5' to 3'
SPOT_ID
Data table ID Genomic location Probe type GB_ACC RANGE_START RANGE_END SEQUENCE SPOT_ID 1
control
DarkCorner
2
control
DarkCorner
3
control
DarkCorner
4
control
DarkCorner
5
control
DarkCorner
6
control
DarkCorner
7
control
DarkCorner
8
control
DarkCorner
9
control
DarkCorner
10
control
DarkCorner
11
control
DarkCorner
12
control
DarkCorner
13
control
DarkCorner
14
control
DarkCorner
15
control
DarkCorner
16
Chromosome
NC_016810.1 1498771
1498830
ATAAAGTTCCGTTAACGCAGTTTTACTTCCCCAGGCATAGTTTTGCACTGAGTTAATGAG
17
Chromosome
NC_016810.1 254487
254546
TAAAATCCTTTTCGTTGGTACTAAACGCGCTGCAAGCGAAGCGGTGAAAGAAGCTGCTAA
18
Chromosome
NC_016810.1 2817941
2818000
CGTTAGCGAGCGTCTGGTCTGGCAATGGATTGATGAGGGCGTCCTTCTCAAAGCTCCCAC
19
Chromosome
NC_016810.1 3388276
3388335
CAGCCAGAGCTCTTCATGGTACTGCCACTGTGACAACGCCAGATCCAGCGAGGCCTCCAG
20
Chromosome
NC_016810.1 378110
378169
CTTGTTTTAAATCTTAAATGTTCTCCCTGTGATTTAAACTGCGCAAATATTCAATACCAG
45220 4584 Kbytes .Supplementary data files not provided
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