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Status
Public on Jun 14, 2005
Title
Novusgene type 3 Hematology/Oncology TMU 667 array
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Homo sapiens Manufacturer
NonusGene Inc.
Manufacture protocol
This DNA chip was made up of tirplicate spots of 60-mer oligonucleotide highly specific probes. To obtain reproducible results, a subset of genes were spotted more than three (i.e housekeeping genes, and negative control).
Support
glass
Coating
other
Description
Pathway focused low-density oligonucleotide microarray which contains 667 selected genes related with hematology and oncology.
Contributor(s)
Ohyashiki JH , Takaku T Submission date
Jun 10, 2005
Last update date
Jun 14, 2005
Contact name
Junko H Ohyashiki
E-mail(s)
junko@hh.iij4u.or.jp Phone
+81-3-3342-6111(ext.5999)
Fax
+81-3-5381-6651
Organization name
Tokyo Medical University
Department
Intractable Immune System Diseases Research Center
Street address
6-7-1, Nishishinjuku, Shinjuku-ku
City
Tokyo
ZIP/Postal code
160-0023
Country
Japan
Samples (30)
GSM60884 , GSM60885 , GSM60886 , GSM60887 , GSM60888 , GSM60889
GSM60890 ,
GSM60891 ,
GSM60892 ,
GSM63816 ,
GSM63817 ,
GSM63818 ,
GSM63819 ,
GSM63820 ,
GSM63821 ,
GSM64055 ,
GSM64056 ,
GSM83839 ,
GSM307939 ,
GSM307940 ,
GSM307941 ,
GSM307942 ,
GSM307943 ,
GSM307944 ,
GSM307945 ,
GSM307946 ,
GSM307947 ,
GSM307948 ,
GSM307949 ,
GSM307950 Series (3)
GSE2810 Comparative analysis of BCR-ABL tyrosine kinase inhibitors in BCR-ABL positive K562 cells
GSE2939 Transcriptional profiling of HHV-6 infeceted T cells
GSE12257 Bioligical pathways and in vitro anti-proliferative activity of Hsp90 inhibition in adult T cell leukemia cells
Data table header descriptions ID
GENE_NAME Gene name
GB_ACC Gene Bank accession number
SPOT_ID GENE_DESCRIPTION Annrtation
Data table ID GENE_NAME GB_ACC SPOT_ID GENE_DESCRIPTION 1
TNFRSF1B
NM_001066 tumor necrosis factor receptor superfamily member 1B (TNFRSF1B) mRNA.
2
TNFRSF19
NM_018647 tumor necrosis factor receptor superfamily member 19 (TNFRSF19) transcript variant 1 mRNA.
3
TLR1
NM_003263 toll-like receptor 1 (TLR1) mRNA.
4
TJP1
NM_003257 tight junction protein 1 (zona occludens 1) (TJP1) transcript variant 1 mRNA.
5
GATA4
NM_002052 GATA binding protein 4 (GATA4) mRNA.
6
GAP43
NM_002045 growth associated protein 43 (GAP43) mRNA.
7
ESR1
NM_000125 estrogen receptor 1 (ESR1) mRNA.
8
ERCC1
NM_001983 excision repair cross-complementing rodent repair deficiency complementation group 1 (includes overlapping antisense sequence) (ERCC1) transcript variant 2 mRNA.
9
DNASE2
NM_001375 deoxyribonuclease II lysosomal (DNASE2) mRNA.
10
DNASE1
NM_005223 deoxyribonuclease I (DNASE1) mRNA.
11
CXCL3
NM_002089 chemokine (C-X-C motif) ligand 3
12
CXCL14
NM_004887 chemokine (C-X-C motif) ligand 14 (CXCL14) mRNA.
13
SPARC
XM_032759 secreted protein acidic cysteine-rich (osteonectin) (SPARC) mRNA.
14
RFC3
NM_002915 replication factor C (activator 1) 3 38kDa (RFC3) transcript variant 1 mRNA.
15
RFC1
NM_002913 replication factor C (activator 1) 1 145kDa (RFC1) mRNA.
16
POU3F4
NM_000307 POU domain class 3 transcription factor 4 (POU3F4) mRNA.
17
POU2F2
NM_002698 POU domain class 2 transcription factor 2 (POU2F2) mRNA.
18
CASP8
NM_001228 caspase 8 apoptosis-related cysteine protease (CASP8) transcript variant A mRNA.
19
CASP6
NM_001226 caspase 6 apoptosis-related cysteine protease (CASP6) transcript variant alpha mRNA.
20
BIRC4
NM_001167 baculoviral IAP repeat-containing 4 (BIRC4) mRNA.
2100 161 Kbytes .Supplementary data files not provided
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