GEO help: Mouse over screen elements for information.
Status
Public on Sep 24, 2005
Title
Agilent-013326 Mouse Oligo Microarray (V2) G4121B (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mus musculus Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4121B
Description
Submission date
Sep 23, 2005
Last update date
Dec 06, 2012
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (310)
GSM119300 , GSM119301 , GSM119322 , GSM119323 , GSM119324 , GSM119325
GSM119326 ,
GSM119327 ,
GSM119328 ,
GSM146470 ,
GSM146474 ,
GSM146482 ,
GSM153902 ,
GSM153903 ,
GSM153904 ,
GSM154093 ,
GSM154094 ,
GSM154095 ,
GSM190221 ,
GSM190223 ,
GSM190224 ,
GSM190227 ,
GSM190229 ,
GSM190231 ,
GSM190250 ,
GSM211515 ,
GSM211516 ,
GSM211517 ,
GSM211518 ,
GSM211519 ,
GSM211520 ,
GSM211521 ,
GSM211522 ,
GSM211523 ,
GSM211524 ,
GSM211525 ,
GSM211526 ,
GSM211527 ,
GSM211528 ,
GSM212681 ,
GSM212682 ,
GSM212683 ,
GSM212684 ,
GSM212685 ,
GSM212686 ,
GSM237856 ,
GSM237857 ,
GSM237858 ,
GSM237859 ,
GSM237860 ,
GSM237861 ,
GSM237862 ,
GSM237863 ,
GSM237864 ,
GSM237865 ,
GSM237866 ,
GSM237867 ,
GSM286619 ,
GSM286620 ,
GSM286621 ,
GSM286622 ,
GSM286623 ,
GSM286624 ,
GSM286625 ,
GSM286626 ,
GSM286627 ,
GSM286628 ,
GSM286629 ,
GSM286630 ,
GSM286631 ,
GSM286632 ,
GSM286633 ,
GSM286634 ,
GSM286635 ,
GSM286636 ,
GSM286637 ,
GSM286638 ,
GSM286639 ,
GSM286640 ,
GSM286641 ,
GSM324340 ,
GSM324341 ,
GSM324342 ,
GSM324343 ,
GSM324344 ,
GSM324345 ,
GSM324346 ,
GSM324347 ,
GSM324348 ,
GSM324349 ,
GSM324350 ,
GSM324351 ,
GSM324352 ,
GSM324353 ,
GSM324354 ,
GSM324355 ,
GSM324356 ,
GSM324357 ,
GSM324358 ,
GSM324359 ,
GSM324360 ,
GSM324361 ,
GSM324362 ,
GSM324363 ,
GSM324364 ,
GSM324365 ,
GSM324366 ,
GSM324367 ,
GSM324368 ,
GSM324369 ,
GSM324370 ,
GSM324371 ,
GSM324372 ,
GSM324373 ,
GSM324374 ,
GSM324375 ,
GSM324376 ,
GSM324377 ,
GSM324378 ,
GSM361033 ,
GSM361034 ,
GSM361035 ,
GSM361036 ,
GSM361037 ,
GSM361038 ,
GSM361039 ,
GSM361040 ,
GSM361041 ,
GSM412133 ,
GSM412134 ,
GSM412135 ,
GSM412136 ,
GSM412137 ,
GSM412138 ,
GSM433649 ,
GSM433650 ,
GSM447004 ,
GSM447559 ,
GSM447560 ,
GSM447561 ,
GSM447562 ,
GSM447563 ,
GSM447564 ,
GSM447565 ,
GSM447566 ,
GSM447567 ,
GSM447568 ,
GSM447569 ,
GSM447570 ,
GSM447571 ,
GSM447572 ,
GSM447573 ,
GSM447574 ,
GSM447575 ,
GSM469305 ,
GSM469306 ,
GSM469307 ,
GSM469308 ,
GSM469309 ,
GSM469310 ,
GSM469311 ,
GSM469312 ,
GSM469313 ,
GSM469314 ,
GSM469315 ,
GSM469316 ,
GSM469317 ,
GSM469318 ,
GSM469319 ,
GSM469320 ,
GSM469321 ,
GSM469322 ,
GSM469323 ,
GSM469324 ,
GSM469325 ,
GSM469326 ,
GSM469327 ,
GSM469328 ,
GSM469329 ,
GSM469330 ,
GSM469331 ,
GSM469332 ,
GSM469333 ,
GSM469334 ,
GSM469335 ,
GSM469336 ,
GSM469337 ,
GSM469338 ,
GSM469339 ,
GSM469340 ,
GSM469341 ,
GSM469342 ,
GSM484415 ,
GSM484416 ,
GSM484417 ,
GSM484418 ,
GSM484419 ,
GSM484420 ,
GSM484421 ,
GSM484422 ,
GSM484423 ,
GSM484424 ,
GSM484425 ,
GSM484426 ,
GSM484427 ,
GSM484428 ,
GSM484429 ,
GSM484430 ,
GSM484431 ,
GSM484432 ,
GSM484433 ,
GSM484434 ,
GSM484435 ,
GSM484436 ,
GSM484437 ,
GSM484438 ,
GSM484439 ,
GSM484440 ,
GSM503875 ,
GSM503876 ,
GSM503877 ,
GSM571030 ,
GSM571031 ,
GSM571032 ,
GSM571033 ,
GSM571034 ,
GSM571037 ,
GSM571038 ,
GSM571039 ,
GSM571040 ,
GSM571041 ,
GSM571042 ,
GSM571043 ,
GSM571044 ,
GSM571045 ,
GSM571046 ,
GSM571047 ,
GSM571048 ,
GSM571049 ,
GSM571050 ,
GSM571051 ,
GSM571052 ,
GSM571053 ,
GSM571054 ,
GSM571055 ,
GSM804354 ,
GSM804355 ,
GSM804356 ,
GSM804357 ,
GSM804359 ,
GSM804360 ,
GSM804361 ,
GSM804362 ,
GSM804363 ,
GSM804364 ,
GSM804365 ,
GSM873944 ,
GSM873945 ,
GSM873946 ,
GSM873947 ,
GSM1046315 ,
GSM1046316 ,
GSM1046318 ,
GSM1046319 ,
GSM1046320 ,
GSM1046321 ,
GSM1046322 ,
GSM1046473 ,
GSM1046474 ,
GSM1046475 ,
GSM1046476 ,
GSM1046493 ,
GSM1046495 ,
GSM1046496 ,
GSM1046497 ,
GSM1046498 ,
GSM1046714 ,
GSM1046720 ,
GSM1046723 ,
GSM1046725 ,
GSM1046728 ,
GSM1046730 ,
GSM1046733 ,
GSM1046736 ,
GSM1046741 ,
GSM1046749 ,
GSM1046929 ,
GSM1046930 ,
GSM1046931 ,
GSM1046932 ,
GSM1046933 ,
GSM1046934 ,
GSM1046937 ,
GSM4714949 ,
GSM4714950 ,
GSM4714951 ,
GSM4714952 ,
GSM4714953 ,
GSM4714954 ,
GSM4714955 ,
GSM4714956 ,
GSM4714957 ,
GSM4714958 ,
GSM4714959 ,
GSM4714960 ,
GSM4714961 ,
GSM4714962 ,
GSM4714963 ,
GSM4714964 ,
GSM4714965 Series (23)
GSE5259 Induction of pluripotent-like cells derived from MEF by defined factors
GSE6305 The poloxamer P-407 chronic hyperlipidemia mouse model
GSE6652 The effect of lovastatin and fenofibrate in a short term diet-induced hyperlipidemia model in mice
GSE7841 Generation of germ-line competent induced pluripotent stem cells
GSE8516 Characterization of mammary tumors from Brg1 heterozygous mice
GSE8568 EXPRESSION PROFILING IN shlOXL2 AND shSNAIL IN HACA CELLS
GSE9343 ETV6-NTRK3 fusion oncogene initiates breast cancer from committed alveolar progenitors via activation of AP1 complex
GSE11346 Serum amyloid and serum amyloid P are not induced in response to diesel exhaust particles or carbon black
GSE12930 Induction of the IL-6/signal transducer and activator of transcription pathway in the lungs of mice exposed to tobacco
GSE14457 Rb deletion in mammary stem/progenitor epithelium induces tumors with features of luminal-B or basal-like breast cancer
GSE16403 Transcriptional profiling of Hepatitis C virus HCV core transgenic mice liver
GSE17344 Analysis of spatial mRNA expression differences in the skin of Casp-8F/–K5-Cre or Casp-8F/+K5-Cre mice
GSE17365 Analysis of mRNA expression differences in the skin of Casp-8F/–K5-Cre and Casp-8F/+K5-Cre mice
GSE17916 FGF Receptor and Wnt-1 Signaling Cooperate in Mammary Tumorigenesis
GSE18949 Modulation of the transcriptional response to recombinant IFN-β by Acetaminophen
GSE19437 Identification of Exposure Biomarkers for Mutagenic Carcinogens in Complex Environmental Matrices
GSE20135 Microarray analysis of Japanese encephalitis virus infected Neuro2a cells
GSE23214 MPA-induced gene expression and stromal and parenchymal gene expression profiles in luminal murine mammary tumors with different hormonal requirements
GSE35188 DIMETHYLBENZANTHRACENE (DMBA) INDUCED MAMMARY CARCINOGENESIS IN MMTV-Neu and MMTV/p53 KO FEMALE MICE AND EFFECTS OF REXINOIDS
GSE35722 Combined PI3K/mTOR and MEK Inhibition Provides Broad Anti-Tumor Activity in Faithful Murine Cancer Models
GSE42640 Transcriptomic Classification of Genetically Engineered Mouse Models of Breast Carcinoma Identifies Human Subtype Counterparts
GSE65677 The Six1 oncoprotein represses translation of p53 via concomitant regulation of RPL26 and microRNA-27a
GSE155239 Understanding BRCA1 function in INK4-RB deficient tumors
Relations Alternative to
GPL7291
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
NAME Name
SPOT_ID Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeqAccession
GB_ACC GenBankAccession
GENE Entrez Gene ID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
TIGR_ID TIGRID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE
Data table ID COL ROW NAME SPOT_ID CONTROL_TYPE REFSEQ GB_ACC GENE GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE 1
105
215
BrightCorner
BrightCorner
pos
2
105
214
NegativeControl
NegativeControl
neg
3
105
213
NM_133204
A_51_P218104
FALSE
NM_133204
NM_133204 170734 Zfp371
zinc finger protein 371
Mm.155595
NP435215
ref|NM_133204|gb|AK139659|gb|AF204776|riken|B020008M15
chr7:5799660-5799719
mm|7qA1
Mus musculus zinc finger protein 371 (Zfp371), mRNA [NM_133204]
GO:0005634(nucleus)|GO:0008270(zinc ion binding)|GO:0046872(metal ion binding)
AGAAATGGAGGTTGGGTTGCCCCTATTCTGAGAGTCTCATCCCTTCATGGTCATTGTATA
4
105
212
NM_134165
A_51_P137188
FALSE
NM_134165
NM_134165 171183 V1rc10
vomeronasal 1 receptor, C10
Mm.377164
ENSMUST00000077482
NP518917
ref|NM_134165|ref|NM_134166|ens|ENSMUST00000077482|ens|ENSMUST00000075750
chr6:66713325-66713384
mm|6qC1
Mus musculus vomeronasal 1 receptor, C10 (V1rc10), mRNA [NM_134165]
GO:0004872(receptor activity)|GO:0005550(pheromone binding)|GO:0005887(integral to plasma membrane)|GO:0016503(pheromone receptor activity)|GO:0019236(response to pheromone)
TAATGATGTTTCTCACTGGAGGGCATGCTTGGCTTAAAGATTTCTTAGGGTCATTGAACA
5
105
211
NM_007507
A_51_P301289
FALSE
NM_007507
NM_007507 11958 Atp5k
ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e
Mm.136093
NP459162
ref|NM_007507|gb|S52977|gb|BC089550|gb|BC028438
chr5:107614972-107614717
mm|5qF
Mus musculus ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e (Atp5k), mRNA [NM_007507]
GO:0005739(mitochondrion)|GO:0006754(ATP biosynthesis)|GO:0006810(transport)|GO:0006811(ion transport)|GO:0015078(hydrogen ion transporter activity)|GO:0015986(ATP synthesis coupled proton transport)|GO:0015992(proton transport)|GO:0016469(proton-transporting two-sector ATPase complex)|GO:0045263(proton-transporting ATP synthase complex, coupling factor F(o))|GO:0046872(metal ion binding)|GO:0046933(hydrogen-transporting ATP synthase activity, rotational mechanism)|GO:0046961(hydrogen-transporting ATPase activity, rotational mechanism)
CGGCGCCAAGCGCTACAGTTACCTAAAACCCCGGGCAGAGGAGGAGAGGAGAATAGCAGC
6
105
210
NM_144512
A_51_P438083
FALSE
NM_144512
NM_144512 14412 Slc6a13
solute carrier family 6 (neurotransmitter transporter, GABA), member 13
Mm.258596
ENSMUST00000064580
NP481351
ref|NM_144512|gb|BC029637|gb|AK149557|ens|ENSMUST00000064580
chr6:121362880-121362939
mm|6qF1
Mus musculus solute carrier family 6 (neurotransmitter transporter, GABA), member 13 (Slc6a13), mRNA [NM_144512]
GO:0005328(neurotransmitter:sodium symporter activity)|GO:0005332(gamma-aminobutyric acid:sodium symporter activity)|GO:0005887(integral to plasma membrane)|GO:0006810(transport)|GO:0006836(neurotransmitter transport)|GO:0015293(symporter activity)|GO:0016020(membrane)|GO:0016021(integral to membrane)
GGTCCACACATTGTGACGTGCCCGAATCAATAACATCCCATTGAGGCAGCTTGGGAAGCC
7
105
209
NA
NA
ignore
8
105
208
NM_172443
A_51_P412225
FALSE
NM_172443
NM_172443 207592 Tbc1d16
TBC1 domain family, member 16
Mm.383265
ENSMUST00000036113
NP588786
ref|NM_172443|gb|BC057634|gb|AK047555|ens|ENSMUST00000036113
chr11:119256258-119256199
mm|11qE2
Mus musculus TBC1 domain family, member 16 (Tbc1d16), mRNA [NM_172443]
TTGTTGTCTGAGTGAACCAAGCACACTTGCGAAGCTTCATGGTCACAGCTGCAAGACTGG
9
105
207
NM_173184
A_51_P201580
FALSE
NM_173184
NM_173184 212108 Rln3
relaxin 3
Mm.261583
ENSMUST00000061923
TC1548190
ref|NM_173184|gb|CB058792|gb|AB076565|ens|ENSMUST00000061923
chr8:82621274-82621215
mm|8qC2
Mus musculus relaxin 3 (Rln3), mRNA [NM_173184]
GO:0005179(hormone activity)|GO:0005576(extracellular region)|GO:0007582(physiological process)|GO:0030819(positive regulation of cAMP biosynthesis)
GCTGTAGCAAGAGCCAAATTAGCAGCTTGTGCTAGGATCAGGGTTGAGCAATGGAGAAGC
10
105
206
XM_978574
A_51_P521155
FALSE
XM_978574
XM_978574 76998 1700124P09Rik
RIKEN cDNA 1700124P09 gene
Mm.246849
TC1538068
ref|XM_978574|ref|XM_884388|ref|XM_992824|ref|XM_923398
chr9:109466763-109466704
mm|9qF2
PREDICTED: Mus musculus RIKEN cDNA 1700124P09 gene (1700124P09Rik), mRNA [XM_978574]
ATGTATATGCATGGGAGGAGAGAAGCCTGCTGCTCAGGAAGTGTTATCGACTGAAAAACA
11
105
205
NM_011792
A_51_P167963
FALSE
NM_011792
NM_011792 23821 Bace1
beta-site APP cleaving enzyme 1
Mm.24044
ENSMUST00000034591
NP576093
ref|NM_011792|gb|BC048189|gb|AK046175|ens|ENSMUST00000034591
chr9:45819517-45819574
mm|9qA5.2
Mus musculus beta-site APP cleaving enzyme 1 (Bace1), mRNA [NM_011792]
GO:0004175(endopeptidase activity)|GO:0004190(aspartic-type endopeptidase activity)|GO:0004194(pepsin A activity)|GO:0006508(proteolysis)|GO:0008233(peptidase activity)|GO:0009049(aspartic-type signal peptidase activity)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0016787(hydrolase activity)|GO:0030424(axon)|GO:0031410(cytoplasmic vesicle)
TGCCTGGATTTTGTTTTTATTTTCTTTCTTTTTGCCCAAGTGGGTACAAAACGATAAGCT
12
105
204
XM_994605
A_51_P158814
FALSE
XM_994605
XM_994605 277010 Marveld1
MARVEL (membrane-associating) domain containing 1
Mm.206250
TC1500102
ref|XM_994605|ref|XM_977387|gb|AK081212|riken|C030005I21
chr19:42043505-42043564
mm|19qC3
PREDICTED: Mus musculus MARVEL (membrane-associating) domain containing 1 (Marveld1), mRNA [XM_994605]
GO:0005554(molecular function unknown)|GO:0008372(cellular component unknown)
CCACTGTTGTTACTAACTCAAGCTCTGCTTTCTCTGGAAACAGGACATAGGACACTGCAT
13
105
203
NM_008825
A_51_P335251
FALSE
NM_008825
NM_008825 18640 Pfkfb2
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
Mm.249861
ENSMUST00000066863
NP583472
ref|NM_008825|gb|X98847|gb|AK029659|gb|AK146744
chr1:130603309-130602806
mm|1qE4
Mus musculus 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 (Pfkfb2), mRNA [NM_008825]
GO:0000166(nucleotide binding)|GO:0003824(catalytic activity)|GO:0003873(6-phosphofructo-2-kinase activity)|GO:0004331(fructose-2,6-bisphosphate 2-phosphatase activity)|GO:0005524(ATP binding)|GO:0006003(fructose 2,6-bisphosphate metabolism)|GO:0008152(metabolism)|GO:0016301(kinase activity)|GO:0016740(transferase activity)|GO:0016787(hydrolase activity)
CCCCTGCACATCATCTTCAAACTTACTCCTGTGGCCTATGGTTGCAAAGTGGAAACAATT
14
105
202
E1A_r60_a20
E1A_r60_a20
pos
15
105
201
NM_010407
A_51_P499910
FALSE
NM_010407
NM_010407 15162 Hck
hemopoietic cell kinase
Mm.715
ENSMUST00000003370
NP853450
ref|NM_010407|gb|AK150709|gb|BC010478|ens|ENSMUST00000003370
chr2:152892206-152892265
mm|2qH1
Mus musculus hemopoietic cell kinase (Hck), mRNA [NM_010407]
GO:0000166(nucleotide binding)|GO:0004672(protein kinase activity)|GO:0004674(protein serine/threonine kinase activity)|GO:0004713(protein-tyrosine kinase activity)|GO:0005524(ATP binding)|GO:0006468(protein amino acid phosphorylation)|GO:0007242(intracellular signaling cascade)|GO:0016020(membrane)|GO:0016301(kinase activity)|GO:0016740(transferase activity)
GAATGACTGAATTCAATCTATAGCTGTGATTTAAGTGGAAACTGTTAGAATAGTATTTAA
16
105
200
AK038079
A_51_P412611
FALSE
AK038079 380977 A330009N23Rik
RIKEN cDNA A330009N23 gene
Mm.120798
gb|AK038079|gb|AK039268|riken|A330009N23|riken|A130076P06
chr15:101207716-101207657
mm|15qF2
Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130076P06 product:unclassifiable, full insert sequence [AK038079]
TGGAAACCTTGCCATATTTTGGGATCCCATACAGCATTTGTTCCTCCAGGAGGATCTGTA
17
105
199
BC049727
A_51_P449657
FALSE
XM_900638
BC049727 71996 1600014K23Rik
RIKEN cDNA 1600014K23 gene
Mm.20201
ENSMUST00000048382
NP358346
gb|BC049727|ens|ENSMUST00000048382|ref|XM_900638|ref|XM_921301
chrX:80656859-80656918
mm|XqC1
Mus musculus, clone IMAGE:6770312, mRNA. [BC049727]
CCCGCATTATATTTCTAGAAGCTTCCCCTGTCTTTCTGTTTGGCATTCTTTGCAATAAAT
18
105
198
NM_178606
A_51_P206346
FALSE
NM_178606
NM_178606 28193 D10Ucla1
DNA segment, Chr 10, University of California at Los Angeles 1
Mm.396104
ENSMUST00000020023
NP804919
ref|NM_178606|ens|ENSMUST00000020023|gb|AK028868|gb|AK005026
chr10:66598621-66598562
mm|10qB5.1
Mus musculus DNA segment, Chr 10, University of California at Los Angeles 1 (D10Ucla1), mRNA [NM_178606]
TTAAACTTACCCTTAGGAGCTAAGGATAGACACCATGCTTGAGGTACACAAGGCCTTGAG
19
105
197
NM_183256
A_51_P291839
FALSE
NM_183256
NM_183256 66379 2310016M24Rik
RIKEN cDNA 2310016M24 gene
Mm.5265
ENSMUST00000023761
NP842952
ref|NM_183256|ens|ENSMUST00000023761|gb|BC092142|gb|AK009401
chr15:99713227-99713286
mm|15qF1
Mus musculus RIKEN cDNA 2310016M24 gene (2310016M24Rik), mRNA [NM_183256]
GAGGCCATCAAGTAAATGGGAATGTGAGGGTGAGGTTTATTACAGAGATTAAATATTTTG
20
105
196
NM_145388
A_51_P365378
FALSE
NM_145388
NM_145388 212989 Vmd2l1
vitelliform macular dystrophy 2-like protein 1
Mm.215154
ENSMUST00000059072
NP647466
ref|NM_145388|gb|BC036163|ens|ENSMUST00000059072|ens|ENSMUST00000078720
chr8:83595694-83595635
mm|8qC2
Mus musculus vitelliform macular dystrophy 2-like protein 1 (Vmd2l1), mRNA [NM_145388]
GO:0005216(ion channel activity)|GO:0005254(chloride channel activity)|GO:0005509(calcium ion binding)|GO:0006810(transport)|GO:0006811(ion transport)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0031404(chloride ion binding)
ACCTGTGGCCTCTGTTGGTCTTCTGACCGTACCTTGGGTTCTTCCCTTCGAGTGGAATTG
22575 11425 Kbytes .Supplementary file Size Download File type/resource GPL2881_old_annotations.txt.gz
3.3 Mb
(ftp) (http) TXT
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