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Series GSE108980 Query DataSets for GSE108980
Status Public on Aug 23, 2018
Title Identification of the ERβ transcriptome in MDA-MB-231 cells [microarray]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The goal of this study was to identify ERβ regulated genes in the triple negative MDA-MB-231 cell line which was engineered to express ERβ in a doxycycline inducible manner
 
Overall design ERβ expressing MDA-MB-231 cells were treated with either vehicle control or 17-beta estradiol for 5 days. Treatments were conducted in replicates of 3. Upon original analysis, replicate 3 from each treatment showed a slight variation from the other two replicates. For this reason, a second sample of RNA from replicate 3 was submitted and the values between the original sample (#3) and the resubmitted sample (#3 rpt) were averaged together and analyzed along with the other two replicates for each treatment.
 
Contributor(s) Hawse JR
Citation(s) 30257941, 35177654
Submission date Jan 09, 2018
Last update date Mar 09, 2022
Contact name Jason Carroll
E-mail(s) Jason.Carroll@cruk.cam.ac.uk
Phone +44 1223 769649
Organization name Cancer Research UK, Cambridge Institute
Street address Li Ka Shing Centre, Robinson Way
City Cambridge
ZIP/Postal code CB2 ORE
Country United Kingdom
 
Platforms (1)
GPL10904 Illumina HumanHT-12 V4.0 expression beadchip (gene symbol)
Samples (8)
GSM2918283 MDA-ER-beta Veh. #1
GSM2918284 MDA-ER-beta Veh. #2
GSM2918285 MDA-ER-beta Veh. #3
This SubSeries is part of SuperSeries:
GSE108981 Identification of the ERβ transcriptome in ER-beta expressing MDA-MB-231 cells
Relations
BioProject PRJNA429299

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108980_RAW.tar 16.4 Mb (http)(custom) TAR (of IDAT)
GSE108980_non_normalized.txt.gz 1.8 Mb (ftp)(http) TXT
Processed data included within Sample table

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