|
| Status |
Public on Oct 01, 2008 |
| Title |
The Early Origins and Evolution of microRNAs and piRNAs in Animals |
| Organisms |
Trichoplax adhaerens; Nematostella vectensis; Monosiga brevicollis; Amphimedon queenslandica |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
We explored the potential for small RNA biology in organisms that diverged basal to Bilateria, identifying both miRNAs and piRNAs in Nematsotella and Amphimedon
|
| |
|
| Overall design |
Employ HTS of endogenous small RNAs
|
| |
|
| Contributor(s) |
Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP |
| Citation(s) |
18830242 |
| |
| Submission date |
Aug 26, 2008 |
| Last update date |
May 15, 2019 |
| Contact name |
andrew grimson |
| Organization name |
Whitehead Institute
|
| Lab |
Bartel
|
| Street address |
9 Cambridge Center
|
| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02142 |
| Country |
USA |
| |
|
| Platforms (4)
|
| GPL9303 |
Illumina Genome Analyzer (Nematostella vectensis) |
| GPL9304 |
Illumina Genome Analyzer (Amphimedon queenslandica) |
| GPL9305 |
Illumina Genome Analyzer (Trichoplax adhaerens) |
| GPL9306 |
Illumina Genome Analyzer (Monosiga brevicollis) |
|
| Samples (17)
|
|
| Relations |
| SRA |
SRP000624 |
| BioProject |
PRJNA112627 |
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