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Series GSE184224 Query DataSets for GSE184224
Status Public on Aug 05, 2023
Title Methylation studies in human cells N76
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus
Sample organism Homo sapiens
Experiment type Methylation profiling by array
Summary An Infinium microarray platform (GPL28271, HorvathMammalMethylChip40) was used to generate DNA methylation data from human cell types.
n=17 human DNA samples from endothelial cells (n=13), embryonic stem cells (n=2) and skin (n=2).
 
Overall design Genome annotations of the array can be downloaded from https://github.com/shorvath/MammalianMethylationConsortium
 
Contributor(s) Horvath S, Raj K
Citation(s) 37493860, 37563227, 38848365
Submission date Sep 15, 2021
Last update date Jun 26, 2024
Contact name Steve Horvath
E-mail(s) shorvath@altoslabs.com
Organization name University of California, Los Angeles
Department Human Genetics
Lab Horvath
Street address 695 Charles E. Young Drive South, Box 708822
City Los Angeles
State/province CA
ZIP/Postal code 90095-7088
Country USA
 
Platforms (1)
GPL28271 Illumina HorvathMammalianMethylChip40 BeadChip
Samples (17)
GSM5582063 Sample1.Human.204854860045_R05C02
GSM5582064 Sample2.Human.204854860045_R06C02
GSM5582065 Sample3.Human.204854860053_R01C01
Relations
BioProject PRJNA763602

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE184224_Explanation_of_characteristic_variables.docx.gz 12.6 Kb (ftp)(http) DOCX
GSE184224_RAW.tar 12.7 Mb (http)(custom) TAR (of IDAT)
GSE184224_README.docx 12.7 Kb (ftp)(http) DOCX
GSE184224_datBetaNormalized.csv.gz 5.2 Mb (ftp)(http) CSV
Processed data are available on Series record

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