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Series GSE209910 Query DataSets for GSE209910
Status Public on Jul 17, 2024
Title CARM1 interacts and hypermethylates the NuRD chromatin remodeling complex to promote gene transcriptional activation and cell cycle progression
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary Protein arginine methyltransferase CARM1 has been shown to methylate a large number of non-histone proteins, and play important roles in gene transcriptional activation, cell cycle progress, and tumorigenesis. However, the critical substrates through which CARM1 exerts its functions remain to be fully characterized. Here, we reported that CARM1 directly interacts with the GATAD2A/2B subunit in the nucleosome remodeling and deacetylase (NuRD) complex, expanding the activities of NuRD to include protein arginine methylation. CARM1 and NuRD bind and activate a large cohort of genes with implications in cell cycle control to facilitate the G1 to S phase transition. This gene activation process requires CARM1 to hypermethylate GATAD2A/2B at a cluster of arginines, which is critical for the recruitment of the NuRD complex. The clinical significance of this gene activation mechanism is underscored by the high expression of CARM1 and NuRD in breast cancers, and the fact that knockdown CARM1 and NuRD inhibits breast cancer cell growth in vitro and tumorigenesis in vivo. These findings reveal a gene activation program that requires the dual specificity established by CARM1 on chromatin and a key chromatin remodeler.
 
Overall design Refer to individual Series
 
Citation(s) 38676947
Submission date Jul 27, 2022
Last update date Jul 18, 2024
Contact name Jiancheng Ding
E-mail(s) djch@xmu.edu.cn
Organization name Xiamen University
Street address School of Pharmaceutical Sciences, Xiamen University Xiang`an South Road
City Xiamen
State/province Fujian
ZIP/Postal code 361102
Country China
 
Platforms (2)
GPL20795 HiSeq X Ten (Homo sapiens)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (22)
GSM6369194 ChIP-Seq_HEK293T_3×HA_CARM1_rep1
GSM6369195 ChIP-Seq_HEK293T_3×HA_CARM1_rep2
GSM6369196 ChIP-Seq_HEK293T_CHD4
This SuperSeries is composed of the following SubSeries:
GSE208775 CARM1 interacts and hypermethylates the NuRD chromatin remodeling complex to promote gene transcriptional activation and cell cycle progression
GSE209909 CARM1 interacts and hypermethylates the NuRD chromatin remodeling complex to promote gene transcriptional activation and cell cycle progression
GSE261973 CARM1 hypermethylates the NuRD chromatin remodeling complex to promote cell cycle gene expression and breast cancer development [ChIP-Seq]
Relations
BioProject PRJNA862920

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE209910_RAW.tar 3.0 Gb (http)(custom) TAR (of BIGWIG, TXT)
SRA Run SelectorHelp

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