|
| Status |
Public on May 06, 2024 |
| Title |
Antagonistic conflict between transposon-encoded introns and guide RNAs |
| Organisms |
Escherichia coli; Clostridium senegalense |
| Experiment type |
Other
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
38991068 |
| |
| Submission date |
Mar 11, 2024 |
| Last update date |
Jul 22, 2024 |
| Contact name |
Samuel Henry Sternberg |
| E-mail(s) |
shsternberg@gmail.com
|
| Phone |
717-475-3658
|
| Organization name |
Columbia University
|
| Department |
Biochemistry and Molecular Biophysics
|
| Lab |
Sternberg Lab
|
| Street address |
701 W. 168th Street, HHSC 726
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10032 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL21222 |
Illumina NextSeq 500 (Escherichia coli) |
| GPL34292 |
Illumina NextSeq 500 (Clostridium senegalense) |
|
| Samples (8)
|
| GSM8140823 |
C. botulinum dTnpB Input |
| GSM8140824 |
C. senegalense total RNA-seq, native |
| GSM8140825 |
C. botulinum IStron total RNA-seq, heterologous |
| GSM8140826 |
C. senegalense IStron-1 total RNA-seq, heterologous |
| GSM8140827 |
C. senegalense IStron-2 total RNA-seq, heterologous |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE261342 |
Antagonistic conflict between transposon-encoded introns and guide RNAs (RIP-Seq) |
| GSE261343 |
Antagonistic conflict between transposon-encoded introns and guide RNAs (RNA-Seq) |
|
| Relations |
| BioProject |
PRJNA1086522 |
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