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Series GSE30924 Query DataSets for GSE30924
Status Public on Jul 26, 2011
Title Salmonella Typhimurium: wild type vs. ∆scsA mutant
Platform organisms Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
Sample organism Salmonella enterica subsp. enterica serovar Typhimurium
Experiment type Expression profiling by array
Summary Transcriptional profiling of log and stationary phases of S. Typhimurium, comparing wild type with the ∆scsA strain.
 
Overall design Each array used labelled cDNA against a common genomic DNA reference. Triplicate arrays were carried out for each of the 4 conditions: wild type log phase, wild type stationary phase, ∆scsA log phase and ∆scsA stationary phase.
 
Contributor(s) Shearer N, Thompson A, Verbrugghe E
Citation(s) 26857846
Submission date Jul 25, 2011
Last update date Jul 29, 2019
Contact name Neil Shearer
E-mail(s) neil.shearer@ifr.ac.uk
Organization name Institute of Food Research
Department Gut Health and Food Safety
Lab Salmonella
Street address Colney Lane
City Norwich
State/province Norfolk
ZIP/Postal code NR47UA
Country United Kingdom
 
Platforms (1)
GPL13609 SALSA 2 IFR Salmonella 8K Arrays
Samples (12)
GSM766485 Wild type log phase, rep1
GSM766486 Wild type log phase, rep2
GSM766487 Wild type log phase, rep3
Relations
BioProject PRJNA146271

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30924_RAW.tar 6.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
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