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Status
Public on May 20, 2011
Title
SALSA 2 IFR Salmonella 8K Arrays
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organisms
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104 ; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ; Salmonella enterica subsp. enterica serovar Enteritidis ; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 ; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
Manufacturer
Institute of Food research, Norwich, UK
Manufacture protocol
PCR product microarray of ORF's from S. Typhimurium LT2, S. Typhimurium SL1344, S. Typhimurium DT104, S. Enteritidis PT4, and S. Gallinarum 287/91. For the description of PCR amplification and printing procedures see: Clements et al., (2002) PNAS 99(13): 8784-8789; Nagy et al., (2006) Infect. Immun. 74(10):5914-5925
Contributor(s)
Thompson A , Lucchini S , Shearer N
Submission date
May 18, 2011
Last update date
May 20, 2011
Contact name
Neil Shearer
E-mail(s)
neil.shearer@ifr.ac.uk
Organization name
Institute of Food Research
Department
Gut Health and Food Safety
Lab
Salmonella
Street address
Colney Lane
City
Norwich
State/province
Norfolk
ZIP/Postal code
NR47UA
Country
United Kingdom
Samples (163)
GSM726956 , GSM726957 , GSM726958 , GSM726959 , GSM726960 , GSM726961
GSM726962 ,
GSM726963 ,
GSM726964 ,
GSM726965 ,
GSM726966 ,
GSM726967 ,
GSM766473 ,
GSM766474 ,
GSM766475 ,
GSM766476 ,
GSM766477 ,
GSM766478 ,
GSM766479 ,
GSM766480 ,
GSM766481 ,
GSM766482 ,
GSM766483 ,
GSM766484 ,
GSM766485 ,
GSM766486 ,
GSM766487 ,
GSM766488 ,
GSM766489 ,
GSM766490 ,
GSM766491 ,
GSM766492 ,
GSM766493 ,
GSM766494 ,
GSM766495 ,
GSM766496 ,
GSM766497 ,
GSM766498 ,
GSM766499 ,
GSM766500 ,
GSM766501 ,
GSM766502 ,
GSM817305 ,
GSM817306 ,
GSM817307 ,
GSM817308 ,
GSM817309 ,
GSM817310 ,
GSM817311 ,
GSM817312 ,
GSM817313 ,
GSM817314 ,
GSM817315 ,
GSM817316 ,
GSM817317 ,
GSM817318 ,
GSM817319 ,
GSM817320 ,
GSM817321 ,
GSM817322 ,
GSM817323 ,
GSM817324 ,
GSM817325 ,
GSM817326 ,
GSM817327 ,
GSM817328 ,
GSM817329 ,
GSM817330 ,
GSM817331 ,
GSM817332 ,
GSM817333 ,
GSM817334 ,
GSM817335 ,
GSM817336 ,
GSM817337 ,
GSM817338 ,
GSM817339 ,
GSM817340 ,
GSM817341 ,
GSM846071 ,
GSM846072 ,
GSM846073 ,
GSM846074 ,
GSM846075 ,
GSM846076 ,
GSM846077 ,
GSM1336508 ,
GSM1336509 ,
GSM1336510 ,
GSM1336511 ,
GSM1336512 ,
GSM1336513 ,
GSM1336514 ,
GSM1336515 ,
GSM1336516 ,
GSM1336517 ,
GSM1336518 ,
GSM1336519 ,
GSM1556081 ,
GSM1556082 ,
GSM1556083 ,
GSM1556084 ,
GSM1556085 ,
GSM1556086 ,
GSM1556087 ,
GSM1556088 ,
GSM1556089 ,
GSM1556090 ,
GSM1556091 ,
GSM1556092 ,
GSM1556093 ,
GSM1556094 ,
GSM1556095 ,
GSM1556096 ,
GSM1556097 ,
GSM1556098 ,
GSM1556099 ,
GSM1556100 ,
GSM1556101 ,
GSM1556102 ,
GSM1556103 ,
GSM1556104 ,
GSM1556105 ,
GSM1556106 ,
GSM1556107 ,
GSM1556108 ,
GSM1556109 ,
GSM1556110 ,
GSM1556111 ,
GSM1556112 ,
GSM1556113 ,
GSM1556114 ,
GSM1556115 ,
GSM1556116 ,
GSM1556117 ,
GSM1556118 ,
GSM1556119 ,
GSM1556120 ,
GSM1556121 ,
GSM1556122 ,
GSM1556123 ,
GSM1556124 ,
GSM1556125 ,
GSM1556126 ,
GSM1556127 ,
GSM1556128 ,
GSM1556129 ,
GSM1556130 ,
GSM1556131 ,
GSM1556132 ,
GSM1556133 ,
GSM1556134 ,
GSM1556135 ,
GSM1556136 ,
GSM1556137 ,
GSM1556138 ,
GSM1556139 ,
GSM1556140 ,
GSM1556141 ,
GSM1556142 ,
GSM1556143 ,
GSM1556144 ,
GSM1556145
Series (10)
GSE29399
Salmonella Typhimurium: control vs. Deoxynivalenol (DON) treatment
GSE30923
Salmonella Typhimurium: control vs. cortisol treatment
GSE30924
Salmonella Typhimurium: wild type vs. ∆scsA mutant
GSE30925
Salmonella Typhimurium: control vs. T2 toxin treatment
GSE32995
Salmonella Typhimurium: Immobilized growth vs. Planktonic growth
GSE34269
Salmonella Typhimurium: Wild type SL1344 Vs. ∆relA, ∆spoT (ppGpp0) strain grown under SPI1-inducing conditions
GSE55430
Effect of cortisol on S. Typhimurium parental strain and an isogenic scsA mutant
GSE63713
Transcriptomic profiles of S. Typhimurium SL1344 parent strain and ΔdksA and ΔrelAΔspoTΔdksA mutant strains grown to various optical densities during late-log and stationary phase in LB aerobic batch culture
GSE63714
Transcriptomic profiles of S. Typhimurium SL1344 parent strain and ΔrpoS and ΔrelAΔspoT and ΔrelAΔspoTΔrpoS mutant strains grown to various optical densities during late-log and stationary phase in LB aerobic batch culture
GSE63715
Transcriptional profiles of Salmonella Typhimurium 4/74 parent and relA spoT, rpoS and dksA strains during stationary phase, and RNA polymerase distribution as determined by chromatin immunoprecipitation in parent, relA spoT and dksA strains
Data table header descriptions
ID
BLOCK
Array layout is 4x4 blocks numbered 1-16 from left to right
ROW
block row 1-21
COLUMN
Block column 1-24
SPOT
SYNONYM
Gene name
ORF
SPOT_ID
Total number of rows: 8064 Table truncated, full table size 322 Kbytes .
Supplementary data files not provided