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Series GSE42533 Query DataSets for GSE42533
Status Public on Dec 29, 2014
Title Her2/Neu tumorigenesis and metastasis is regulated by E2F transcription factors
Organism Mus musculus
Experiment type Expression profiling by array
Summary HER2 / Neu is amplified and overexpressed in a large proportion of human breast cancers, but the signaling pathways that contribute to tumor development and metastatic progression are not completely understood. Using gene expression data and pathway signatures we predicted a role for activator E2F transcription factors in Neu induced tumors. This was genetically tested by interbreeding Neu transgenics with knockouts of the three activator E2Fs. Loss of any E2F delayed Neu induced tumor onset. E2F1 loss accelerated tumor growth while E2F2 and E2F3 loss did not. Strikingly, it was observed that loss of E2F1 or E2F2 significantly reduced the metastatic capacity of the tumor and this was associated with a reduction in circulating tumor cells in the E2F2 knockout. Gene expression analysis between the tumors in the various E2F mutant backgrounds revealed that there was extensive compensation by other E2F family members in the individual knockouts, underscoring the importance of the E2Fs in HER2 / Neu induced tumors. Extension to HER2 positive human breast cancer revealed a number of HER2+ subtypes based on E2F activity with differences in relapse free survival times. Taken together these data demonstrate that the E2F transcription factors are integral to HER2+ tumor development and progression.
 
Overall design MMTV-Neu tumors in a wild type E2F background and E2F1 knockout, E2F2 knockout and E2F3 +/- backgrounds were analyzed for their gene expression changes.
 
Contributor(s) Andrechek ER
Citation(s) 24362522, 37805590
Submission date Nov 27, 2012
Last update date Oct 20, 2023
Contact name Eran Andrechek
Phone 517-884-5042
Organization name Michigan State University
Department Physiology
Lab Andrechek
Street address 2120 BPS Building
City East Lansing
State/province MI
ZIP/Postal code 48824
Country USA
 
Platforms (1)
GPL8321 [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array
Samples (60)
GSM1044292 Neu_1131
GSM1044293 Neu_1132
GSM1044294 Neu_1357
Relations
BioProject PRJNA182217

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42533_RAW.tar 118.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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