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GEO accession:
Series GSE54623
Query DataSets for GSE54623
Status
Public on Jun 15, 2015
Title
DNA methylation profiles in primary cutaneous melanoma are associated with clinically significant pathologic features
Organism
Homo sapiens
Experiment type
Methylation profiling by array
Summary
We investigated whether methylation in primary melanomas is associated with tumor pathologic features or defines subgroups of primary melanomas
Overall design
47 primary cutaneous melanomas were analyzed using the Illumina GoldenGate Cancer Panel I methylation array
Contributor(s)
Thomas NE
,
Slater NA
,
Edmiston SN
,
Zhou X
,
Kuan PF
,
Groben PA
,
Carson CC
,
Hao H
,
Parrish E
,
Moschos SJ
,
Berwick M
,
Ollila DW
,
Conway K
Citation(s)
25934889
Submission date
Feb 03, 2014
Last update date
Jun 15, 2015
Contact name
Nathaniel Allen Slater
Organization name
University of North Carolina School of Medicine
Department
Dermatology
Lab
Nancy Thomas
Street address
413 Mary Ellen Jones Building, 116 Manning Drive, CB#7287
City
Chapel Hill
State/province
North Carolina
ZIP/Postal code
27599
Country
USA
Platforms (1)
GPL9183
Illumina GoldenGate Methylation Cancer Panel I
Samples (47)
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GSM1320016
cutaneous primary melanoma PGEM126
GSM1320017
cutaneous primary melanoma PGEM556
GSM1320018
cutaneous primary melanoma PGEM569
GSM1320019
cutaneous primary melanoma PGEM013
GSM1320020
cutaneous primary melanoma PGEM014
GSM1320021
cutaneous primary melanoma PGEM006
GSM1320022
cutaneous primary melanoma PGEM019
GSM1320023
cutaneous primary melanoma PGEM005
GSM1320024
cutaneous primary melanoma PGEM021
GSM1320025
cutaneous primary melanoma PGEM007
GSM1320026
cutaneous primary melanoma PGEM002
GSM1320027
cutaneous primary melanoma PGEM557
GSM1320028
cutaneous primary melanoma PGEM583
GSM1320029
cutaneous primary melanoma PGEM004
GSM1320030
cutaneous primary melanoma PGEM009
GSM1320031
cutaneous primary melanoma PGEM016
GSM1320032
cutaneous primary melanoma PGEM552
GSM1320033
cutaneous primary melanoma PGEM562
GSM1320034
cutaneous primary melanoma PGEM572
GSM1320035
cutaneous primary melanoma PGEM575
GSM1320036
cutaneous primary melanoma PGEM578
GSM1320037
cutaneous primary melanoma PGEM580
GSM1320038
cutaneous primary melanoma PGEM588
GSM1320039
cutaneous primary melanoma PGEM001
GSM1320040
cutaneous primary melanoma PGEM010
GSM1320041
cutaneous primary melanoma PGEM560
GSM1320042
cutaneous primary melanoma PGEM570
GSM1320043
cutaneous primary melanoma PGEM574
GSM1320044
cutaneous primary melanoma PGEM579
GSM1320045
cutaneous primary melanoma PGEM022
GSM1320046
cutaneous primary melanoma PGEM117
GSM1320047
cutaneous primary melanoma PGEM555
GSM1320048
cutaneous primary melanoma PGEM558
GSM1320049
cutaneous primary melanoma PGEM124
GSM1320050
cutaneous primary melanoma PGEM554
GSM1320051
cutaneous primary melanoma PGEM559
GSM1320052
cutaneous primary melanoma PGEM571
GSM1320053
cutaneous primary melanoma PGEM017
GSM1320054
cutaneous primary melanoma PGEM003
GSM1320055
cutaneous primary melanoma PGEM011
GSM1320056
cutaneous primary melanoma PGEM503
GSM1320057
cutaneous primary melanoma PGEM561
GSM1320058
cutaneous primary melanoma PGEM573
GSM1320059
cutaneous primary melanoma PGEM589
GSM1320060
cutaneous primary melanoma PGEM504
GSM1320061
cutaneous primary melanoma PGEM566
GSM1320062
cutaneous primary melanoma PGEM581
Relations
BioProject
PRJNA237203
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Supplementary file
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File type/resource
GSE54623_signal_intensities.txt.gz
899.4 Kb
(ftp)
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TXT
Processed data included within Sample table
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