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| Status |
Public on Jul 13, 2015 |
| Title |
Unique gene program of rat mesenteric arteries as revealed by Deep RNA Sequencing |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
This study used Deep RNA sequencing to define gene expression in the small resistance arteries and compare to a reference conduit artery, the aorta
Methods: Deep RNA Sequencing (~90 million reads) was performed on 2 samples of adult SD rat mesenteric arteries and compared to that of 2 samples of aorta.
Results: ~900 genes were identified that were expressed at least 2-fold difference between meseteric artery and aorta
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| |
|
| Overall design |
mRNA profiles of 2 samples of rat mesenteric artery and 2 samples of rat aorta were sequenced using Illumina HiSeq
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| |
|
| Contributor(s) |
Reho J, Shetty A, Dippold R, Mahurkar A, Fisher SA |
| Citation(s) |
26156969 |
| |
| Submission date |
Dec 22, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Amol Carl Shetty |
| E-mail(s) |
ashetty@som.umaryland.edu
|
| Organization name |
University of Maryland Baltimore
|
| Department |
Institute for Genome Sciences
|
| Street address |
670 W. Baltimore Street, Floor 3
|
| City |
Baltimore |
| State/province |
Maryland |
| ZIP/Postal code |
21201 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL14844 |
Illumina HiSeq 2000 (Rattus norvegicus) |
|
| Samples (4)
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| Relations |
| BioProject |
PRJNA271028 |
| SRA |
SRP051483 |
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