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Sample GSM140203 Query DataSets for GSM140203
Status Public on Oct 16, 2007
Title HMEC/hTERT/eIF4E/polysomal RNA 3
Sample type other
 
Source name HMEC/hTERT/eIF4E
Organism Homo sapiens
Characteristics Cell line
Breast
hTERT immortalized
eIF4E expresssion
Growth protocol Serum starvation for 24h, see manuscript
Extracted molecule other
Extraction protocol Polysomal preparation, see manuscript
Label Biotin
Label protocol Affymetrix single round labelling
 
Description Comparison of polysomal and total RNA between HMEC/hTERT and HMEC/hTERT/eIF4E cells.
Data processing GCRMA using custom HS133P_HS_REFSEQ_6
 
Submission date Oct 16, 2006
Last update date Oct 18, 2006
Contact name Ola Larsson
E-mail(s) ola.larsson@ki.se
Phone +46 (0)8 517 73280
Organization name Karolinska Institutet
Department Department of oncology-pathology
Street address CCK, R8:01
City Stockholm
ZIP/Postal code 171 76
Country Sweden
 
Platform ID GPL4454
Series (1)
GSE6043 Translation initiation factor 4E confers primary human cells with neoplastic properties

Data table header descriptions
ID_REF
VALUE GCRMA normalized expression

Data table
ID_REF VALUE
AFFX-BioB-3_at 6.31771770407897
AFFX-BioB-5_at 7.03084315729404
AFFX-BioB-M_at 7.5811253154655
AFFX-BioC-3_at 7.92504821813108
AFFX-BioC-5_at 7.94624467473589
AFFX-BioDn-3_at 10.8333610541367
AFFX-BioDn-5_at 8.51785787004622
AFFX-CreX-3_at 13.1086815235696
AFFX-CreX-5_at 12.3039351775218
AFFX-DapX-3_at 9.98941340622738
AFFX-DapX-5_at 6.95449939466844
AFFX-DapX-M_at 8.48935012011628
AFFX-HSAC07/X00351_3_at 14.7925379500983
AFFX-HSAC07/X00351_5_at 12.7280503057276
AFFX-HSAC07/X00351_M_at 13.4628724723151
AFFX-hum_alu_at 13.7661417950159
AFFX-HUMGAPDH/M33197_3_at 14.2019237510098
AFFX-HUMGAPDH/M33197_5_at 13.4851465993318
AFFX-HUMGAPDH/M33197_M_at 13.9462725177974
AFFX-HUMISGF3A/M97935_3_at 8.58546767046802

Total number of rows: 23597

Table truncated, full table size 694 Kbytes.




Supplementary file Size Download File type/resource
GSM140203.cel.gz 7.7 Mb (ftp)(http) CEL

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