|
| Status |
Public on May 25, 2015 |
| Title |
VEPH1 expressing SKOV3 cells treated with TGF-ß rep2 |
| Sample type |
RNA |
| |
|
| Source name |
SKOV3 Ovarian cancer cell line
|
| Organism |
Homo sapiens |
| Characteristics |
treatment: TGF-ß 3 hr treatment
transfection: VEPH1
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Standard Trizol extractions, assessed the RNA using the Agilent Bioanalyzer (all RINS were 10)
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
replicate number 2
|
| Data processing |
The data were normalised using quantile normalisation with GeneSpring v.12.1
|
| |
|
| Submission date |
Apr 10, 2015 |
| Last update date |
May 25, 2015 |
| Contact name |
carl virtanen |
| E-mail(s) |
cvirtane@uhnresearch.ca
|
| Organization name |
University Health Network
|
| Department |
Princess Margaret Genomics Centre
|
| Street address |
101 College St
|
| City |
Toronto |
| State/province |
Ontario |
| ZIP/Postal code |
M5G 1L7 |
| Country |
Canada |
| |
|
| Platform ID |
GPL10558 |
| Series (1) |
| GSE67765 |
VEPH1 expression in ovarian cancer cell lines and its relationship to TGF-B signaling |
|
