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Sample GSM1657587 Query DataSets for GSM1657587
Status Public on Sep 25, 2019
Title Control_fetal_lung_rep10 [miRNA]
Sample type RNA
 
Source name Fetal lung, E18.5, from control mother
Organism Mus musculus
Characteristics strain/background: Balb/c
genotype/variation: WT
tissue: fetal lung
age: E18.5
gender: female
treatment: untreated mother
Treatment protocol Mice were treated as described in the paper. Briefly, eight-week-old virgin females were mated with each one proven male breeder for 24h. To allow proper implantation of the fertilized oocyte, mice were exposed from gestational day (GD) 2.5 to smoke or filtered air until GD 17.5.
Growth protocol Animals housed under spf conditions.
Extracted molecule total RNA
Extraction protocol miRNeasy (Qiagen).
Label Biotin
Label protocol FlashTag Biotin HSR kit (Genisphere).
 
Hybridization protocol According to the Affymetrix expression protocol (HWS kit).
Scan protocol According to the Affymetrix expression protocol with GeneChip Scanner 3000 7G.
Description Ctrl_F301
Gene expression data from fetal lung, E18.5, from control mother.
Data processing RMA probeset summary with standard settings (RMA+DABG) of the Affymetrix Expression Console software (v.1.3.0.187).
 
Submission date Apr 14, 2015
Last update date Sep 26, 2019
Contact name Johannes Beckers
E-mail(s) johannes.beckers@helmholtz-munich.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL16384
Series (2)
GSE67886 Deregulated pulmonary growth hormones after intrauterine smoke exposure
GSE67888 Deregulated pulmonary growth hormones after intrauterine smoke exposure

Data table header descriptions
ID_REF
VALUE RMA signal intensity (log2)

Data table
ID_REF VALUE
14q0_st 2.027
14qI-1_st 3.225
14qI-1_x_st 2.437
14qI-2_st 1.981
14qI-3_x_st 1.848
14qI-4_st 1.847
14qI-4_x_st 1.819
14qI-5_st 1.899
14qI-6_st 1.558
14qI-6_x_st 1.672
14qI-7_st 2.043
14qI-8_st 2.079
14qI-8_x_st 2.357
14qI-9_x_st 2.085
14qII-1_st 2.048
14qII-1_x_st 2.261
14qII-10_st 1.753
14qII-10_x_st 1.833
14qII-11_st 2.944
14qII-11_x_st 2.074

Total number of rows: 25015

Table truncated, full table size 564 Kbytes.




Supplementary file Size Download File type/resource
GSM1657587_Ctrl_F301.CEL.gz 973.4 Kb (ftp)(http) CEL
Processed data included within Sample table

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