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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Sep 03, 2015 |
| Title |
S. pombe ED668 Δupf1 1 |
| Sample type |
SRA |
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| Source name |
S. pombe ED668 Δupf1
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| Organism |
Schizosaccharomyces pombe |
| Characteristics |
strain: ED668 delta upf1
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| Growth protocol |
30 C, unless heatshock
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| Extracted molecule |
polyA RNA |
| Extraction protocol |
phenol chloroform extraction
RNAseq, lariat sequencing
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| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina HiSeq 2000 |
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| Description |
Trueseq RNAseq
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| Data processing |
Genome_build: Schizosaccharomyces_pombe.ASM294v2.21.dna.genome
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| Submission date |
Apr 28, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Jeffrey A Pleiss |
| E-mail(s) |
jpleiss@cornell.edu
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| Organization name |
Cornell University
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| Department |
Molecular Biology and Genetics
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| Street address |
451 Biotech
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| City |
Ithaca |
| State/province |
NY |
| ZIP/Postal code |
14853 |
| Country |
USA |
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| Platform ID |
GPL13988 |
| Series (1) |
| GSE68345 |
RNAseq and Lariat sequencing of different S. pombe growth conditions |
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| Relations |
| BioSample |
SAMN03570535 |
| SRA |
SRX1012411 |
| Supplementary data files not provided |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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