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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jul 28, 2011 |
| Title |
Illumina HiSeq 2000 (Schizosaccharomyces pombe) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Schizosaccharomyces pombe |
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| Submission date |
Jul 28, 2011 |
| Last update date |
Jul 13, 2017 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (801)
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GSM768586, GSM768587, GSM768588, GSM768589, GSM768590, GSM768591
GSM768592, GSM768593, GSM870204, GSM870205, GSM870206, GSM991008, GSM991009, GSM991010, GSM991011, GSM991012, GSM991013, GSM991016, GSM991017, GSM991018, GSM991019, GSM991020, GSM991021, GSM991022, GSM994397, GSM994398, GSM994399, GSM994400, GSM994401, GSM994402, GSM1051302, GSM1051303, GSM1051304, GSM1051305, GSM1051306, GSM1051307, GSM1051308, GSM1051309, GSM1051310, GSM1051311, GSM1051312, GSM1129506, GSM1129507, GSM1129508, GSM1129509, GSM1129510, GSM1129511, GSM1129512, GSM1129513, GSM1129514, GSM1129515, GSM1129516, GSM1129517, GSM1129518, GSM1201968, GSM1201969, GSM1201970, GSM1201971, GSM1201972, GSM1201973, GSM1201974, GSM1201975, GSM1201980, GSM1201981, GSM1201982, GSM1201983, GSM1201984, GSM1201985, GSM1201986, GSM1201987, GSM1201988, GSM1201989, GSM1201990, GSM1201991, GSM1201992, GSM1201993, GSM1201994, GSM1201995, GSM1201996, GSM1201997, GSM1201998, GSM1201999, GSM1202000, GSM1202001, GSM1202002, GSM1202003, GSM1202004, GSM1202005, GSM1202006, GSM1202007, GSM1202008, GSM1202009, GSM1202010, GSM1202011, GSM1202012, GSM1202013, GSM1202014, GSM1202015, GSM1202016, GSM1202017, GSM1202018, GSM1202019, GSM1202020, GSM1202021, GSM1202022, GSM1202023, GSM1202024, GSM1202025, GSM1202026, GSM1202027, GSM1202028, GSM1202029, GSM1202030, GSM1202031, GSM1202032, GSM1202033, GSM1202034, GSM1202035, GSM1202036, GSM1214806, GSM1214807, GSM1214808, GSM1214809, GSM1214810, GSM1214811, GSM1216864, GSM1216865, GSM1216866, GSM1216867, GSM1264149, GSM1264150, GSM1264151, GSM1264152, GSM1264153, GSM1264154, GSM1264155, GSM1264156, GSM1264157, GSM1264158, GSM1264159, GSM1264160, GSM1264161, GSM1264162, GSM1264163, GSM1264164, GSM1267070, GSM1267071, GSM1267072, GSM1267073, GSM1267074, GSM1267075, GSM1267076, GSM1267077, GSM1267078, GSM1267079, GSM1267080, GSM1267081, GSM1267082, GSM1267083, GSM1267084, GSM1269368, GSM1269369, GSM1276537, GSM1276538, GSM1322111, GSM1322112, GSM1322113, GSM1322114, GSM1322115, GSM1322116, GSM1322117, GSM1322118, GSM1373640, GSM1373641, GSM1379427, GSM1379428, GSM1379429, GSM1379430, GSM1379431, GSM1429718, GSM1429719, GSM1429720, GSM1429721, GSM1429722, GSM1429723, GSM1429724, GSM1429725, GSM1432450, GSM1432451, GSM1446258, GSM1446259, GSM1467474, GSM1467476, GSM1467477, GSM1467478, GSM1467479, GSM1467480, GSM1467481, GSM1468965, GSM1468966, GSM1468967, GSM1468968, GSM1479698, GSM1479699, GSM1479700, GSM1484029, GSM1484030, GSM1484031, GSM1484032, GSM1484033, GSM1484034, GSM1498232, GSM1498233, GSM1519714, GSM1519715, GSM1519716, GSM1519717, GSM1519718, GSM1519719, GSM1519720, GSM1519721, GSM1519722, GSM1519723, GSM1519724, GSM1585537, GSM1585538, GSM1585539, GSM1585540, GSM1585541, GSM1585542, GSM1633567, GSM1633568, GSM1633569, GSM1633570, GSM1633572, GSM1633573, GSM1633574, GSM1634684, GSM1634685, GSM1634686, GSM1634687, GSM1637653, GSM1637654, GSM1637655, GSM1637656, GSM1646415, GSM1646416, GSM1668850, GSM1668851, GSM1668852, GSM1668853, GSM1668854, GSM1668855, GSM1668856, GSM1668857, GSM1668858, GSM1668859, GSM1668860, GSM1668861, GSM1668862, GSM1668863, GSM1668864, GSM1668865, GSM1668866, GSM1668867, GSM1668868, GSM1668869, GSM1668870, GSM1668871, GSM1754836, GSM1754837, GSM1754838, GSM1754839, GSM1754840, GSM1754841, GSM1754842, GSM1754843, GSM1754844, GSM1754845, GSM1823700, GSM1823701, GSM1902805, GSM1902806, GSM1902807, GSM1902808, GSM1902809, GSM1902810, GSM1902811, GSM1902812, GSM1902813, GSM1902814, GSM1902815, GSM1902816, GSM1921613, GSM1921614, GSM1921615, GSM1958430, GSM1958431, GSM1958432, GSM1972537, GSM1972538, GSM1972539, GSM1972540, GSM1974985, GSM1974986, GSM1974988, GSM2029473, GSM2029474, GSM2029475, GSM2029476, GSM2048199, GSM2048200, GSM2048201, GSM2048202, GSM2048203, GSM2125959, GSM2125960, GSM2125961, GSM2125962, GSM2125963, GSM2125964, GSM2125965, GSM2125966, GSM2125967, GSM2125968, GSM2125969, GSM2125970, GSM2150390, GSM2150391, GSM2150392, GSM2150393, GSM2174859, GSM2174860, GSM2174861, GSM2174862, GSM2174863, GSM2174864, GSM2174865, GSM2174866, GSM2174867, GSM2174868, GSM2204423, GSM2204424, GSM2204425, GSM2204426, GSM2204427, GSM2204428, GSM2204429, GSM2204430, GSM2204431, GSM2204432, GSM2204433, GSM2204434, GSM2204435, GSM2204436, GSM2204437, GSM2204438, GSM2204439, GSM2204440, GSM2204441, GSM2204442, GSM2204443, GSM2204444, GSM2204445, GSM2204446, GSM2204447, GSM2204448, GSM2204449, GSM2204450, GSM2204451, GSM2204452, GSM2204453, GSM2204454, GSM2204455, GSM2204456, GSM2204457, GSM2204458, GSM2204459, GSM2204460, GSM2204461, GSM2204462, GSM2204463, GSM2204464, GSM2204465, GSM2204466, GSM2204467, GSM2204468, GSM2204469, GSM2204470, GSM2204471, GSM2204472, GSM2204473, GSM2204474, GSM2204475, GSM2204476, GSM2204477, GSM2204478, GSM2204479, GSM2204480, GSM2204481, GSM2204482, GSM2204483, GSM2204484, GSM2204485, GSM2204486, GSM2204487, GSM2204488, GSM2204489, GSM2204490, GSM2204491, GSM2204492, GSM2204493, GSM2256840, GSM2256841, GSM2256842, GSM2256843, GSM2256844, GSM2256845, GSM2258030, GSM2258031, GSM2258032, GSM2258033, GSM2304877, GSM2304878, GSM2304879, GSM2304880, GSM2304881, GSM2304882, GSM2304883, GSM2304884, GSM2304885, GSM2304886, GSM2410428, GSM2410429, GSM2410430, GSM2410431, GSM2446256, GSM2446257, GSM2446258, GSM2446259, GSM2446260, GSM2446261, GSM2446262, GSM2446263, GSM2446264, GSM2446265, GSM2446266, GSM2446267, GSM2446268, GSM2446269, GSM2446270, GSM2446271, GSM2446272, GSM2464865, GSM2464866, GSM2464867, GSM2464868, GSM2464869, GSM2464870, GSM2464871, GSM2464872, GSM2476215, GSM2476216, GSM2476219, GSM2476220, GSM2476221, GSM2476222, GSM2476223, GSM2476224, GSM2476225, GSM2476226, GSM2476227, GSM2476228, GSM2476229, GSM2476230, GSM2476231, GSM2476232, GSM2476233, GSM2476234, GSM2476235, GSM2476236, GSM2476237, GSM2476238, GSM2476239, GSM2476240, GSM2476241, GSM2476242, GSM2476243, GSM2476244, GSM2476245, GSM2559619, GSM2559620, GSM2576781, GSM2576782, GSM2576783, GSM2576784, GSM2576785, GSM2576786, GSM2576787, GSM2576788...
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| Series (114)
|
| GSE30837 |
RNAi promotes heterochromatic silencing through replication-coupled release of RNA pol II (superseries) |
| GSE31016 |
RNAi promotes heterochromatic silencing through replication-coupled release of RNA pol II (ChIP-seq) |
| GSE35524 |
Mediator promotes CENP-A incorporation at fission yeast centromeres [ChIP-seq] |
| GSE35527 |
Mediator promotes CENP-A incorporation at fission yeast centromeres |
| GSE40298 |
The unfolded protein response in fission yeast modulates stability of select mRNAs to maintain protein homeostasis |
| GSE40451 |
Hrp3 controls nucleosome positioning to suppress non-coding transcription in eu- and heterochromatin [MNase-Seq] |
| GSE40453 |
Hrp3 controls nucleosome positioning to suppress non-coding transcription in eu- and heterochromatin |
| GSE42848 |
Genome wide map of heterochromatin state in fission yeast Schizosaccharomyces pombe |
| GSE42849 |
Small RNA expression in swi6 mutants or dcr1 delta fission yeast Schizosaccharomyces pombe |
| GSE42850 |
Heterochromatin state in fission yeast Schizosaccharomyces pombe |
| GSE46382 |
Yeast X-Chromosome Associated Protein 5 (Xap5) Functions with H2A.Z to Suppress Aberrant Transcripts [RNA-seq] |
| GSE46506 |
Yeast X-Chromosome Associated Protein 5 (Xap5) Functions with H2A.Z to Suppress Aberrant Transcripts |
| GSE49572 |
Spt6 regulates intragenic and antisense transcription, nucleosome positioning, and histone modifications genome-wide in fission yeast [Mnase-seq] |
| GSE49574 |
Spt6 regulates intragenic and antisense transcription, nucleosome positioning, and histone modifications genome-wide in fission yeast [ChIP-seq] |
| GSE49575 |
Spt6 regulates intragenic and antisense transcription, nucleosome positioning, and histone modifications genome-wide in fission yeast |
| GSE50156 |
Gene expression profiles mas5D, ssa2D, hsf1-overexpressing and heat-stressed wild type Schizosaccharomyces pombe cells |
| GSE50246 |
LaSSO, a strategy for genome-wide mapping of intronic lariats and branch-points using RNA-seq |
| GSE52370 |
Individual letters of the RNA polymerase II CTD code govern distinct gene expression programs in fission yeast |
| GSE52444 |
Effects of RNAi protein overexpression in mutant cells on H3K9 dimethylation in fission yeast cells |
| GSE52532 |
Generation of Rdp1-independent primary siRNAs |
| GSE52535 |
Determinants of heterochromatic siRNA biogenesis and function |
| GSE52809 |
Poly(A)-tail profiling reveals an embryonic switch in translational control |
| GSE54685 |
Eic1 links Mis18 with the CCAN/Mis6/Ctf19 complex to promote CENP-A assembly |
| GSE56849 |
High resolution Hi-C analysis in S. pombe reveals fundamental elements of genome architecture |
| GSE57040 |
A Novel HDAC Complex in the Control of Transcription and Genome Stability |
| GSE57316 |
High resolution Hi-C analysis in S. pombe reveals fundamental elements of genome architecture (NGS) |
| GSE59170 |
RNA expression profiling for Paf1 complex mutant strains [miRNA] |
| GSE59171 |
RNA expression profiling for Paf1 complex mutant strains |
| GSE59768 |
Promoter nucleosome dynamics regulated by signaling through the CTD code |
| GSE60195 |
yeast U6 3' RACE |
| GSE60198 |
The Mpn1 exonuclease defines a novel spliceosomal snRNA decay pathway dependent on Rrp6 and Lsm2-8 complex |
| GSE60273 |
Interaction between TBP and condensing drives the organization and faithful segregation of mitotic chromosomes |
| GSE60429 |
Dicer and Hsp104 function in a negative feedback loop to confer epigenetic robustness [RNA_profiles] |
| GSE60638 |
Dicer and Hsp104 function in a negative feedback loop to confer epigenetic robustness [RNA_correlations] |
| GSE60640 |
Dicer and Hsp104 function in a negative feedback loop to confer epigenetic robustness |
| GSE61136 |
Genome wide map of heterochromatin state in fission yeast Schizosaccharomcyces pombe (S. pombe) |
| GSE62108 |
A global profile of replication polymerase usage |
| GSE63120 |
Widespread Co-translational RNA Decay Reveals Ribosome Dynamics |
| GSE64991 |
The fission yeast MTREC complex targets CUTs and unspliced mRNAs to the nuclear exosome [RNA-Seq] |
| GSE64992 |
The fission yeast MTREC complex targets CUTs and unspliced mRNAs to the nuclear exosome |
| GSE66865 |
A nucleosome turnover map reveals that the stability of histone H4 Lys20 methylation depend on histone recycling in transcribed chromatin [ChIP-exo] |
| GSE66866 |
A nucleosome turnover map reveals that the stability of histone H4 Lys20 methylation depend on histone recycling in transcribed chromatin |
| GSE66939 |
Paf1 complex factors, Leo1 and Paf1, promote local histone turnover to modulate chromatin states in fission yeast [ChIP-exo] |
| GSE66941 |
Paf1 complex factors, Leo1 and Paf1, promote local histone turnover to modulate chromatin states in fission yeast |
| GSE67410 |
Abo1, a conserved bromodomain AAA-ATPase maintains global nucleosome occupancy and organization |
| GSE68345 |
RNAseq and Lariat sequencing of different S. pombe growth conditions |
| GSE70435 |
RNAseq measurments of gene expression during simultanous replication and mitosis using the S. Pombe minimal cell cycle strain |
| GSE70485 |
m1A marks translation initiation sites in human and mouse messenger RNA [Sequencing] |
| GSE70717 |
Cdk1 activity levels drive periodic transcription independently of cell cycle progression |
| GSE70945 |
Small RNA profiles in wt and swi6 deletion strains |
| GSE70946 |
H3K9 methylation extends across natural boundaries of heterochromatin in the absence of an HP1 protein |
| GSE73792 |
Comparison of RNA profiling between wild type, med20∆, rrp6∆ and med20∆/rrp6∆ in Schizosaccharomyces pombe |
| GSE74487 |
Swi1/Timeless prevents repeat instability at fission yeast telomeres |
| GSE75517 |
Prp4 Kinase Grants the License to Splice: Control of Weak Splice Sites during Spliceosome Activation |
| GSE76058 |
m1A marks translation initiation sites in human and mouse messenger RNA |
| GSE76142 |
Divergence of Transcription Regulation and the Function of a Conserved Elongation Factor in Budding and Fission Yeast |
| GSE77290 |
A NOVEL EPIGENETIC SILENCING PATHWAY INVOLVING the HIGHLY CONSERVED 5'-3' EXORIBONUCLEASE Dhp1/Rat1/Xrn2 in SCHIZOSACCHAROMYCES POMBE [CRAC-seq] |
| GSE77291 |
A NOVEL EPIGENETIC SILENCING PATHWAY INVOLVING the HIGHLY CONSERVED 5'-3' EXORIBONUCLEASE Dhp1/Rat1/Xrn2 in SCHIZOSACCHAROMYCES POMBE |
| GSE80398 |
Transient RNA-DNA Hybrids Are Required for Efficient Double-Strand Break Repair |
| GSE81323 |
The CENP-B fission yeast homolog, ABP1, is involved in the repression of cryptic transcription from the Tf2 and rRNA genes repeat [ChIP-Seq_BGI] |
| GSE81326 |
The CENP-B fission yeast homolog, ABP1, is involved in the repression of cryptic transcription from the Tf2 and rRNA genes repeat |
| GSE81731 |
Distinct Functions of Argonaute Slicer in siRNA Maturation and Heterochromatin Formation [ChIP-Seq] |
| GSE81732 |
Distinct Functions of Argonaute Slicer in siRNA Maturation and Heterochromatin Formation [ncRNA-seq 1] |
| GSE81733 |
Distinct Functions of Argonaute Slicer in siRNA Maturation and Heterochromatin Formation [ncRNA-seq 2] |
| GSE81734 |
Distinct Functions of Argonaute Slicer in siRNA Maturation and Heterochromatin Formation |
| GSE83495 |
A transcriptionally permissive histone H3 lysine 9 methylation state enables RNAi-mediated heterochromatin assembly |
| GSE84883 |
Transient RNA-DNA Hybrids Are Required for Efficient Double-Strand Break Repair |
| GSE85046 |
Transcription start site positioning is not affected by +1 nucleosome depletion |
| GSE85124 |
Genome-wide analyses reveal widespread roles for Spt5 in sense and antisense transcription [NET-seq] |
| GSE85182 |
Genome-wide analyses reveal widespread roles for Spt5 in sense and antisense transcription |
| GSE86512 |
Bag101 overexpression in S. pombe |
| GSE90688 |
Genome-wide data of RNAs associated to Mmi1 in wild type Schizosaccharomyces pombe cells |
| GSE93198 |
Architectural alterations of the fission yeast genome across the cell cycle |
| GSE93906 |
Rbm10 promotes heterochromatin assembly by interacting with Clr6 and chromatin remodeling complexes |
| GSE94474 |
Condensin-mediated remodeling of the mitotic chromatin landscape in fission yeast |
| GSE94475 |
Condensin-mediated remodeling of the mitotic chromatin landscape in fission yeast |
| GSE94478 |
Condensin-mediated remodeling of the mitotic chromatin landscape in fission yeast |
| GSE96883 |
Shelterin Mediates Genome Reorganization in Response to Replication Stress |
| GSE97203 |
U2AF65Prp2 promotes intron definition by stabilizing U1 snRNP at the 5’ splice site |
| GSE97746 |
The Conserved RNA Binding Cyclophilin, Rct1, Regulates Small RNA Biogenesis and Splicing Independent of Heterochromatin Assembly [ChIP-seq] |
| GSE97747 |
The Conserved RNA Binding Cyclophilin, Rct1, Regulates Small RNA Biogenesis and Splicing Independent of Heterochromatin Assembly [RNA-seq] |
| GSE97749 |
The Conserved RNA Binding Cyclophilin, Rct1, Regulates Small RNA Biogenesis and Splicing Independent of Heterochromatin Assembly |
| GSE98381 |
Genome-wide chromatin conformation capture (Hi-C) analysis in fission yeast. |
| GSE102125 |
Next generation sequencing for quantitative analysis of wild type and Y41F transcriptomes |
| GSE102376 |
Global fine-tuning of translation by queuosinylation and Dnmt2-dependent tRNA methylation |
| GSE102590 |
A Cdk9-PP1 switch regulates the elongation-termination transition of RNA polymerase II |
| GSE110976 |
Comprehensive profiling of the fission yeast transcription start site activity during stress and media response. |
| GSE115595 |
Common mechanism of transcription termination at coding and noncoding RNA genes in fission yeast |
| GSE115682 |
Cdk9 and H2Bub1 signal to Clr6-CII/Rpd3S to suppress aberrant antisense transcription |
| GSE116657 |
Leo1 is essential for dynamic regulation of heterochromatin and gene expression during cellular quiescence [RNA-Seq] |
| GSE119237 |
SFP1 (RNA-seq) |
| GSE119238 |
The roles of duplication and divergence in the evolution of a transcription factor |
| GSE119745 |
Physical basis for long-distance communication along meiotic chromosomes (ChIP-seq) |
| GSE119785 |
Effect of D2O on S. pombe gene expression |
| GSE119921 |
Physical basis for long-distance communication along meiotic chromosomes |
| GSE124090 |
The chaperone FACT and H2B ubiquitination maintain S. pombe genome architecture through genic and subtelomeric functions [RNA-seq] |
| GSE124091 |
The chaperone FACT and H2B ubiquitination maintain S. pombe genome architecture through genic and subtelomeric functions [MNase-seq] |
| GSE124092 |
The chaperone FACT and H2B ubiquitination maintain S. pombe genome architecture through genic and subtelomeric functions |
| GSE125911 |
Abo1 is required for H3K9me2 to H3K9me3 transition in telomeric and centromeric heterochromatin [ChIP-seq] |
| GSE125912 |
Abo1 is required for H3K9me2 to H3K9me3 transition in telomeric and centromeric heterochromatin |
| GSE130845 |
The zinc-responsive repressor Loz1 is the master regulator of zinc homeostasis in Schizosaccharomyces pombe [RNA-seq] |
| GSE130846 |
The zinc-responsive repressor Loz1 is the master regulator of zinc homeostasis in Schizosaccharomyces pombe |
| GSE135766 |
The chaperone FACT and H2B ubiquitination maintain S. pombe genome architecture through genic and subtelomeric functions [ChIP-Seq] |
| GSE138436 |
Epigenetic gene silencing by heterochromatin primes fungal resistance |
| GSE159723 |
Transcriptome sequencing of genes related to glucose availability in Schizosaccharomyces pombe by RNA-seq analysis |
| GSE160852 |
Transcriptional profiling of fission yeast RNA polymerase II CTD mutants |
| GSE163866 |
The evolution, evolvability, and engineering of gene regulatory DNA [RNA-seq] |
| GSE174641 |
The histone chaperone FACT facilitates heterochromatin spreading through regulation of histone turnover and H3K9 methylation states |
| GSE178511 |
Investigation of mettl4 mediated alterative splicing variation |
| GSE179677 |
Small RNA sequencing of the 8 to 30-nucleotide window from various samples |
| GSE196504 |
Quantitative analysis of wild type and set2 mutant transcriptomes |
| GSE227183 |
Topoisomerase 1 facilitates nucleosome reassembly at stress genes during recovery [RNA-seq] |
| GSE227184 |
Topoisomerase 1 facilitates nucleosome reassembly at stress genes during recovery. |
| GSE230503 |
Cellular responses toatmospheric-pressure plasma in fission yeast |
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| Supplementary data files not provided |
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