|
Status |
Public on Apr 02, 2007 |
Title |
breast tumor-b0317 |
Sample type |
RNA |
|
|
Source name |
TISSUE_ID b0317
|
Organism |
Homo sapiens |
Characteristics |
ER+ nodal_status: N0 DFS_years:11.45 age:73
|
Biomaterial provider |
Chew, K & Dairkee, SH
|
Extracted molecule |
total RNA |
Extraction protocol |
Qiagen RNAesy purification from formaide extracted samples
|
Label |
biotin
|
Label protocol |
Affymetrix Gene Expression TP 21 (performed by HTArray Genomics Core Facility of Lawrence Berkeley National Laboratory)
|
|
|
Hybridization protocol |
Affymetrix Comm Hyb Setup 21 & Affymetrix Comm Wash Stain 21 (performed by HTArray Genomics Core Facility of Lawrence Berkeley National Laboratory)
|
Scan protocol |
GeneChip HT Scanner protocol v2.2.09 (performed by HTArray Genomics Core Facility of Lawrence Berkeley National Laboratory)
|
Description |
Gene expression data from ER+ N0 breast cancer from old cohort
|
Data processing |
RMA normalization with affy package in Bioconductor R
|
|
|
Submission date |
Mar 27, 2007 |
Last update date |
Apr 01, 2007 |
Contact name |
Christina Yau |
E-mail(s) |
cyau@buckinstitute.org
|
Phone |
415-209-2248
|
Organization name |
Buck Institute of Age Research
|
Lab |
Benz Lab
|
Street address |
8001 Redwood Blvd
|
City |
Novato |
State/province |
CA |
ZIP/Postal code |
94945 |
Country |
USA |
|
|
Platform ID |
GPL4685 |
Series (1) |
GSE7378 |
Expression data from age-dichotomized ER+, N0 breast tumors |
|