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Sample GSM205908 Query DataSets for GSM205908
Status Public on Nov 15, 2007
Title Tumour 118
Sample type RNA
 
Source name primary Ewing tumour
Organism Homo sapiens
Characteristics sex:female
age at diagnosis:16.0y
primary site:vertebra
stage at diagnosis:metastatic
genetic:unstable
follow-up:112w
follow-up:dead
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from frozen tumor samples using TRI-REAGENT. Quality of the RNA was assayed using the Agilent Bioanalyzer
Label biotin
Label protocol Supplied for the manufacturer
 
Hybridization protocol Supplied for the manufacturer
Scan protocol Arrays scanned in an Axon GenePix 400 scanner
Description GSM205908 and GSM207898 represent Primary Ewing Sarcoma Tumor # 7
Data processing Cyclic loess method was used to scale microarrays
 
Submission date Jun 26, 2007
Last update date Aug 14, 2011
Contact name Javier Alonso
E-mail(s) fjalonso@isciii.es
Phone 34-91-8223217
Organization name INSTITUTO DE SALUD CARLOS III - IIER
Department AREA DE GENÉTICA HUMANA
Lab UNIDAD DE TUMORES SOLIDOS INFANTILES
Street address CTRA. MAJADAHONDA-POZUELO KM 2
City MAJADAHONDA
State/province MADRID
ZIP/Postal code 28220
Country Spain
 
Platform ID GPL2891
Series (1)
GSE8303 Gene expression profiling and array CGH in Ewing's sarcoma

Data table header descriptions
ID_REF
VALUE Cyclic loess normalized log2

Data table
ID_REF VALUE
109 2.041159651
110 1.730036398
111 3.400198155
112 null
113 5.446582467
114 4.720816576
116 5.531904107
117 2.552139892
118 1.848869135
119 2.999612523
120 2.384626542
121 2.121502273
123 2.94184741
124 2.034278566
125 3.883695109
126 2.691474231
127 2.213952365
128 4.802536463
130 5.175473936
131 4.38162075

Total number of rows: 20500

Table truncated, full table size 350 Kbytes.




Supplementary file Size Download File type/resource
GSM205908.TXT.gz 1.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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