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Sample GSM310516

Query DataSets for GSM310516

Status

Public on Aug 22, 2011

Title

PB3 Constitutional HindIII

Sample type

genomic

Source name

Blood, PB3 Constitutional HindIII

Organism

Homo sapiens

Characteristics

gender: female
age: 13 months

Extracted molecule

genomic DNA

Extraction protocol

Phenol/Chloroform Isoamyl Alcohol and PLG tubes

Label

Biotin

Label protocol

Affymetrix 100K Labeling Protocol

Hybridization protocol

Affymetrix 100K Hybridisation Protocol

Scan protocol

Affymetrix 100K Scanning Protocol

Description

PB3 Constitutional HindIII

Data processing

GCOS

Submission date

Aug 07, 2008

Last update date

Aug 22, 2011

Contact name

Suzanne Miller

Phone

01158230718

Fax

01158230696

URL

http://www.cbtrc.org

Organization name

Children's Brain Tumour Research Centre

Department

Human Development

Lab

D18

Street address

Queen's Medical Centre

City

Nottingham

State/province

Nottinghamshire

ZIP/Postal code

NG72UH

Country

United Kingdom

Platform ID

GPL2004

Series (1)

GSE12370

Genome-wide molecular characterisation of CNS PNET and Pineoblastoma

Data table header descriptions
ID_REF
VALUE	Genotypes: AA, AB, BB, No Call
CONFIDENCE
RAS1	Relative allele signal for the data in the first probe group
RAS2	Relative allele signal for the data in the second probe group
P-VALUE AA
P-VALUE AB
P-VALUE BB
P-VALUE NO CALL

Data table
ID_REF	VALUE	CONFIDENCE	RAS1	RAS2	P-VALUE AA	P-VALUE AB	P-VALUE BB	P-VALUE NO CALL
AFFX-5Q-123	No Call	0	0	0	0	0	0	0
AFFX-5Q-456	No Call	0	0	0	0	0	0	0
AFFX-5Q-789	No Call	0	0	0	0	0	0	0
AFFX-5Q-ABC	No Call	0	0	0	0	0	0	0
AFFX-barcodeA	No Call	0	0	0	0	0	0	0
AFFX-barcodeB	No Call	0	0	0	0	0	0	0
AFFX-barcodeC	No Call	0	0	0	0	0	0	0
AFFX-barcodeD	No Call	0	0	0	0	0	0	0
AFFX-barcodeE	No Call	0	0	0	0	0	0	0
AFFX-barcodeF	No Call	0	0	0	0	0	0	0
AFFX-barcodeG	No Call	0	0	0	0	0	0	0
AFFX-barcodeH	No Call	0	0	0	0	0	0	0
AFFX-barcodeI	No Call	0	0	0	0	0	0	0
AFFX-barcodeJ	No Call	0	0	0	0	0	0	0
AFFX-barcodeK	No Call	0	0	0	0	0	0	0
AFFX-barcodeL	No Call	0	0	0	0	0	0	0
AFFX-barcodeM	No Call	0	0	0	0	0	0	0
AFFX-barcodeN	No Call	0	0	0	0	0	0	0
AFFX-barcodeO	No Call	0	0	0	0	0	0	0
AFFX-barcodeP	No Call	0	0	0	0	0	0	0

Total number of rows: 57299

Table truncated, full table size 4729 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM310516.CEL.gz	19.2 Mb	(ftp)(http)	CEL
GSM310516.CHP.gz	187.1 Kb	(ftp)(http)	CHP
Processed data included within Sample table
Processed data provided as supplementary file