|
Status |
Public on Feb 28, 2010 |
Title |
HYB105 |
Sample type |
genomic |
|
|
Channel 1 |
Source name |
UCI107
|
Organism |
Homo sapiens |
Characteristics |
sample type: cell line tissue origin: ovarian
|
Extracted molecule |
genomic DNA |
Extraction protocol |
genomic DNA isolated using proteinase-K treatment and phenol chloroform purification
|
Label |
Cy5
|
Label protocol |
according to manufacturer's protocol
|
|
|
Channel 2 |
Source name |
male pool
|
Organism |
Homo sapiens |
Characteristics |
sample type: tissue
|
Extracted molecule |
genomic DNA |
Extraction protocol |
genomic DNA isolated using proteinase-K treatment and phenol chloroform purification
|
Label |
Cy3
|
Label protocol |
according to manufacturer's protocol
|
|
|
|
Hybridization protocol |
according to manufacturer's protocol
|
Scan protocol |
using Agilent Feature Extraction 8.5 Software
|
Description |
-
|
Data processing |
Subtraction background correction and loess normalisation were applied to the data. Scan-date dependent biases were corrected by subtracting systematic noise across all arrays for each scan date
|
|
|
Submission date |
Oct 07, 2009 |
Last update date |
Nov 20, 2009 |
Contact name |
Charlotte K Y Ng |
Organization name |
University Hospital Basel
|
Department |
Pathology
|
Street address |
Schönbeinstrasse 40
|
City |
Basel |
ZIP/Postal code |
4003 |
Country |
Switzerland |
|
|
Platform ID |
GPL2879 |
Series (1) |
GSE18453 |
DNA copy number data from the CTCR-OV01 study |
|