|
Status |
Public on Sep 15, 2011 |
Title |
KrasTgfbr2wt lung tumor specimen 103 |
Sample type |
RNA |
|
|
Source name |
KrasTgfbr2wt lung tumor, 9 weeks
|
Organism |
Mus musculus |
Characteristics |
strain background: LSL-KrasG12D x C57/Bl6 genotype/variation: KrasTgfbr2wt tissue: lung tumor
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA was extracted using Rneasy minikit;Qiagen,Valencia,CA
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA was generated by the modified Eberwine protocol
|
|
|
Hybridization protocol |
cRNA was hybridized to the Affymetrix(Santa Clara,CA) 430 2.0 arrays
|
Scan protocol |
GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
|
Description |
Gene expression data from KrasTgfbr2wt lung tumor
|
Data processing |
Array data were normalized using the RMA algorithm with R/Bioconductor as implemented in BRB-Array Tools V4.1.
|
|
|
Submission date |
Mar 04, 2011 |
Last update date |
Sep 15, 2011 |
Contact name |
Charles A Powell |
E-mail(s) |
charles.powell@mssm.edu
|
Fax |
212-876-5519
|
Organization name |
Mount Sinai School of Medicine
|
Department |
MEDICINE/PULMONARY
|
Street address |
One Gustave Levy Place, Box 1232
|
City |
New York |
State/province |
NY |
ZIP/Postal code |
10029 |
Country |
USA |
|
|
Platform ID |
GPL1261 |
Series (2) |
GSE27675 |
Expression data from lung tumor and stromal cells of KrasTgfbr2 -/- mouse model |
GSE27719 |
Lung adenocarcinoma invasion and progression |
|