|
| Status |
Public on Mar 31, 2024 |
| Title |
LTS (long-term survival) glioblastoma FFPE sample 13 |
| Sample type |
genomic |
| |
|
| Source name |
Glioblastoma FFPE tissue
|
| Organism |
Homo sapiens |
| Characteristics |
Sex: F
age at diagnosis (years): 60
kps: 100
overall survival (months): 72
last follow-up: Dead
tumor localization: Temporal
tumor side: Right
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was extracted and purified from tumor sample using MagPurix according to standard instructions for automatic extraction of genomic DNA
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human MethylationEPIC Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using iSCAN using standard recommended Illumina scanner setting
|
| Data processing |
Data loading with method minfi of function champ.load
|
| |
|
| Submission date |
Apr 27, 2023 |
| Last update date |
Mar 31, 2024 |
| Contact name |
Evelina Miele |
| E-mail(s) |
evelina.miele@opbg.net
|
| Organization name |
Ospedale Pediatrico Bambino Gesù
|
| Department |
Oncoematologia
|
| Street address |
Piazza di Sant'Onofrio 4
|
| City |
Rome |
| ZIP/Postal code |
00165 |
| Country |
Italy |
| |
|
| Platform ID |
GPL21145 |
| Series (1) |
| GSE230770 |
Clinicopathological and molecular landscape of 5-year IDH-wild-type glioblastoma survivors: a multicentric retrospective study |
|
