GSE63713[Accession] - GEO DataSets

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Select item 2000637131.

Transcriptomic profiles of S. Typhimurium SL1344 parent strain and ΔdksA and ΔrelAΔspoTΔdksA mutant strains grown to various optical densities during late-log and stationary phase in LB aerobic batch culture

(Submitter supplied) S. Typhimurium SL1344 parental strain and isogenic ΔrpoS, ΔdksA and ΔrelAΔspoT, ΔrelAΔspoTΔrpoS and ΔrelAΔspoTΔdksA strains were grown to OD600=1.0, OD600=2.3, OD600=3.0 and OD600=4.2 in Luria-Bertani medium.

Organism:: Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Type:: Expression profiling by array

Platform:: GPL13609
30 Samples

Download data: TXT

Series

Accession:: GSE63713

ID:: 200063713

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000136092.

SALSA 2 IFR Salmonella 8K Arrays

(Submitter supplied) PCR product microarray of ORF's from S. Typhimurium LT2, S. Typhimurium SL1344, S. Typhimurium DT104, S. Enteritidis PT4, and S. Gallinarum 287/91. For the description of PCR amplification and printing procedures see: Clements et al., (2002) PNAS 99(13): 8784-8789; Nagy et al., (2006) Infect. Immun. 74(10):5914-5925

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

10 Series
163 Samples

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Platform

Accession:: GPL13609

ID:: 100013609

Select item 3015561103.

dksA_R1_OD1

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 1_optical density (600 nm) of 1.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556110

ID:: 301556110

Select item 3015561094.

dksA_R1_OD24

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 1_optical density (600 nm) of 2.4 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556109

ID:: 301556109

Select item 3015561085.

dksA_R1_OD3

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 1_optical density (600 nm) of 3.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556108

ID:: 301556108

Select item 3015561076.

dksA_R1_OD36

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 1_optical density (600 nm) of 3.6 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556107

ID:: 301556107

Select item 3015561067.

dksA_R2_OD1

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 2_optical density (600 nm) of 1.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556106

ID:: 301556106

Select item 3015561058.

dksA_R2_OD24

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 2_optical density (600 nm) of 2.4 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556105

ID:: 301556105

Select item 3015561049.

dksA_R2_OD3

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 2_optical density (600 nm) of 3.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556104

ID:: 301556104

Select item 30155610310.

dksA_R2_OD36

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 2_optical density (600 nm) of 3.6 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556103

ID:: 301556103

Select item 30155610211.

dksA_R3_OD1

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 3_optical density (600 nm) of 1.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556102

ID:: 301556102

Select item 30155610112.

dksA_R3_OD24

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 3_optical density (600 nm) of 2.4 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556101

ID:: 301556101

Select item 30155610013.

dksA_R3_OD3

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 3_optical density (600 nm) of 3.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556100

ID:: 301556100

Select item 30155609914.

dksA_R3_OD36

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 3_optical density (600 nm) of 3.6 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556099

ID:: 301556099

Select item 30155609815.

dksA_R4_OD1

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔdksA. Biol. Rep. 4_optical density (600 nm) of 1.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556098

ID:: 301556098

Select item 30155609716.

ppGpp_dksA_R1_OD42

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoTΔdksA. Biol. Rep. 1_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556097

ID:: 301556097

Select item 30155609617.

ppGpp_dksA_R2_OD42

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoTΔdksA. Biol. Rep. 2_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63713 GSE63715

Download data: TXT

Sample

Accession:: GSM1556096

ID:: 301556096

Select item 30155609518.

ppGpp_dksA_R3_OD42

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoTΔdksA. Biol. Rep. 3_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)