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Status |
Public on May 31, 2015 |
Title |
Transcriptomic profiles of S. Typhimurium SL1344 parent strain and ΔdksA and ΔrelAΔspoTΔdksA mutant strains grown to various optical densities during late-log and stationary phase in LB aerobic batch culture |
Platform organisms |
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 |
Sample organism |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 |
Experiment type |
Expression profiling by array
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Summary |
S. Typhimurium SL1344 parental strain and isogenic ΔrpoS, ΔdksA and ΔrelAΔspoT, ΔrelAΔspoTΔrpoS and ΔrelAΔspoTΔdksA strains were grown to OD600=1.0, OD600=2.3, OD600=3.0 and OD600=4.2 in Luria-Bertani medium.
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Overall design |
30 samples (parent strain, ΔdksA, and ΔrelAΔspoTΔdksA at late-log, early stationary, mid-stationary and late stationary growth phases and 3 or 5 biological replicates for each sample.
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Contributor(s) |
Thompson A |
Citation(s) |
26039089 |
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Submission date |
Nov 28, 2014 |
Last update date |
Jan 08, 2020 |
Contact name |
Arthur Thompson |
E-mail(s) |
arthur.thompson@ifr.ac.uk
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Phone |
01603 255181
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Organization name |
Institute of Food Research
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Street address |
Colney Lane
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City |
Norwich |
ZIP/Postal code |
NR4 7UA |
Country |
United Kingdom |
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Platforms (1) |
GPL13609 |
SALSA 2 IFR Salmonella 8K Arrays |
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Samples (30)
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This SubSeries is part of SuperSeries: |
GSE63715 |
Transcriptional profiles of Salmonella Typhimurium 4/74 parent and relA spoT, rpoS and dksA strains during stationary phase, and RNA polymerase distribution as determined by chromatin immunoprecipitation in parent, relA spoT and dksA strains |
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Relations |
BioProject |
PRJNA268955 |