GSE63714[Accession] - GEO DataSets

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Select item 2000637141.

Transcriptomic profiles of S. Typhimurium SL1344 parent strain and ΔrpoS and ΔrelAΔspoT and ΔrelAΔspoTΔrpoS mutant strains grown to various optical densities during late-log and stationary phase in LB aerobic batch culture

(Submitter supplied) S. Typhimurium SL1344 parental strain and isogenic ΔrpoS, ΔrelAΔspoT and ΔrelAΔspoTΔrpoS strains were grown to OD600=1.0, OD600=2.3, OD600=3.0 and OD600=4.2 in Luria-Bertani medium.

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis

Type:: Expression profiling by array

Platform:: GPL13609
35 Samples

Download data: GPR

Series

Accession:: GSE63714

ID:: 200063714

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000136092.

SALSA 2 IFR Salmonella 8K Arrays

(Submitter supplied) PCR product microarray of ORF's from S. Typhimurium LT2, S. Typhimurium SL1344, S. Typhimurium DT104, S. Enteritidis PT4, and S. Gallinarum 287/91. For the description of PCR amplification and printing procedures see: Clements et al., (2002) PNAS 99(13): 8784-8789; Nagy et al., (2006) Infect. Immun. 74(10):5914-5925

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

10 Series
163 Samples

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Platform

Accession:: GPL13609

ID:: 100013609

Select item 3015561453.

ppGpp_R1_OD1

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 1_optical density (600 nm) of 1.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556145

ID:: 301556145

Select item 3015561444.

ppGpp_R1_OD23

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 1_optical density (600 nm) of 2.3 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556144

ID:: 301556144

Select item 3015561435.

ppGpp_R1_OD30

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 1_optical density (600 nm) of 3.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556143

ID:: 301556143

Select item 3015561426.

ppGpp_R1_OD42

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 1_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556142

ID:: 301556142

Select item 3015561417.

ppGpp_R2_OD1

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 2_optical density (600 nm) of 1.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556141

ID:: 301556141

Select item 3015561408.

ppGpp_R2_OD23

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 2_optical density (600 nm) of 2.3 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556140

ID:: 301556140

Select item 3015561399.

ppGpp_R2_OD30

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 2_optical density (600 nm) of 3.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556139

ID:: 301556139

Select item 30155613810.

ppGpp_R2_OD42

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 2_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556138

ID:: 301556138

Select item 30155613711.

ppGpp_R3_OD1

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 3_optical density (600 nm) of 1.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556137

ID:: 301556137

Select item 30155613612.

ppGpp_R3_OD23

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 3_optical density (600 nm) of 2.3 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556136

ID:: 301556136

Select item 30155613513.

ppGpp_R3_OD30

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 3_optical density (600 nm) of 3.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556135

ID:: 301556135

Select item 30155613414.

ppGpp_R3_OD42

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoT. Biol. Rep. 3_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556134

ID:: 301556134

Select item 30155613315.

ppGpp_rpoS_R1_OD42

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoTΔrpoS. Biol. Rep. 1_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556133

ID:: 301556133

Select item 30155613216.

ppGpp_rpoS_R2_OD42

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoTΔrpoS. Biol. Rep. 2_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)

Platform:: GPL13609
Series:: GSE63714 GSE63715

Download data: GPR

Sample

Accession:: GSM1556132

ID:: 301556132

Select item 30155613117.

ppGpp_rpoS_R3_OD42

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

Source name:: S. Typhimurium ΔrelAΔspoTΔrpoS. Biol. Rep. 3_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)