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| Status |
Public on May 31, 2015 |
| Title |
Transcriptomic profiles of S. Typhimurium SL1344 parent strain and ΔrpoS and ΔrelAΔspoT and ΔrelAΔspoTΔrpoS mutant strains grown to various optical densities during late-log and stationary phase in LB aerobic batch culture |
| Platform organisms |
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 |
| Sample organism |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 |
| Experiment type |
Expression profiling by array
|
| Summary |
S. Typhimurium SL1344 parental strain and isogenic ΔrpoS, ΔrelAΔspoT and ΔrelAΔspoTΔrpoS strains were grown to OD600=1.0, OD600=2.3, OD600=3.0 and OD600=4.2 in Luria-Bertani medium.
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| Overall design |
35 samples (parent, ΔrpoS, ppGpp^0 and ΔrelAΔspoTΔrpoS at late-log, early stationary, mid-stationary and late stationary growth phases and 3 biological replicates for each sample.
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| |
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| Contributor(s) |
Thompson A |
| Citation(s) |
26039089 |
| |
| Submission date |
Nov 28, 2014 |
| Last update date |
Jan 08, 2020 |
| Contact name |
Arthur Thompson |
| E-mail(s) |
arthur.thompson@ifr.ac.uk
|
| Phone |
01603 255181
|
| Organization name |
Institute of Food Research
|
| Street address |
Colney Lane
|
| City |
Norwich |
| ZIP/Postal code |
NR4 7UA |
| Country |
United Kingdom |
| |
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| Platforms (1) |
| GPL13609 |
SALSA 2 IFR Salmonella 8K Arrays |
|
| Samples (35)
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| This SubSeries is part of SuperSeries: |
| GSE63715 |
Transcriptional profiles of Salmonella Typhimurium 4/74 parent and relA spoT, rpoS and dksA strains during stationary phase, and RNA polymerase distribution as determined by chromatin immunoprecipitation in parent, relA spoT and dksA strains |
|
| Relations |
| BioProject |
PRJNA268954 |
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