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Platform GPL550 Query DataSets for GPL550
Status Public on Apr 18, 2004
Title UNC compugen oligo array for toxgenomics study
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Homo sapiens
 
Description Compugen oligo Catalog# HUMLIB96: Human OligoLibrary Release 1.0: 96 well format, 197 plates (18,861 oligos), plus about 1000 custom-designed oligos for Dr. Charles Perou's lab at University of North Carolina at Chapel Hill.
Keywords = Breast Cancer
Keywords = Chemotherapeutics
Keywords = Gene expression
Keywords = Microarray
Keywords = Compugen
 
Web link http://www.labonweb.com/cgi-bin/chips/display_toplevel_list.cgi?type=l
Contributor(s) Troester MA, Hoadley KA, Sorlie T, Herbert B, Shay J, Perou CM
Submission date Oct 16, 2003
Last update date Jul 17, 2015
Contact name Charles M. Perou
E-mail(s) cperou@med.unc.edu
Organization name University of North Carolina at Chapel Hill
Department Professor of Genetics, and Pathology & Laboratory Medicine; Lineberger Comprehensive Cancer Center
Street address 12-044 Lineberger Comprehensive Cancer Center CB# 7295
City Chapel Hill
State/province NC
ZIP/Postal code 27599-7264
Country USA
 
Samples (83) GSM11680, GSM11681, GSM11682, GSM11683, GSM11684, GSM11685 
Series (2)
GSE763 Cell-type specific responses to chemotherapeutics in breast cancer
GSE1647 Prediction of toxicant-specific gene expression signatures following chemotherapeutic treatment of breast cell lines

Data table header descriptions
ID
GB_ACC GenBank Accession Number
COMPUGEN_PROBE_ID Compugen gene probe ID
SPOT_ID

Data table
ID GB_ACC COMPUGEN_PROBE_ID SPOT_ID
1 AI676060 32513-001
2 NM_024012 32513-002
3 AI820067 32513-003
4 NM_020988 32513-004
5 NM_000866 32513-005
6 U83571 32513-006
7 AI869397 32513-007
8 NM_006311 32513-008
9 AA418082 32513-009
10 AI784512 32513-010
11 NM_002529 32513-011
12 NM_005633 32513-012
13 NM_002135 32513-013
14 NM_006917 32513-014
15 AI400617 32513-015
16 AA054202 32513-016
17 AF005392 32513-017
18 NM_031498 32513-018
19 NM_006009 32513-019
20 NM_021012 32513-020

Total number of rows: 20163

Table truncated, full table size 682 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
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Supplementary data files not provided

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