|
| Status |
Public on Aug 31, 2009 |
| Title |
Transcriptome analysis of rice in relation to infection with rice tungro spherical virus (RTSV) |
| Platform organism |
Oryza sativa Japonica Group |
| Sample organism |
Oryza sativa Indica Group |
| Experiment type |
Expression profiling by array
|
| Summary |
Near-isogenic lines TW16-4 and TW16-69 were developed from the cross between TN1 (recurrent parent susceptible to RTSV) and Utri Merah (donor parent resistant to RTSV). TW16-4 is susceptible to RTSV, whereas TW16-69 is resistant to RTSV based on a serolog.
Keywords: time course, virus infection, disease response
|
| |
|
| Overall design |
Comparison between RTSV and mock-infected rice. Biological replicates: 2 control (mock), 2 RTSV-infected, independently grown and harvested at 7 days after inoculation (DAI). Each sample was prepared using leaf tissues pooled from 5 plants grown under the same conditions.
|
| |
|
| Contributor(s) |
Satoh K, Kondoh H, Kimura S, De Leon T, Kikuchi S |
| Citation(s) |
19737100 |
| |
| Submission date |
Jan 27, 2009 |
| Last update date |
Mar 08, 2020 |
| Contact name |
IL-RYONG CHOI |
| E-mail(s) |
ichoi@cgiar.org
|
| Organization name |
International Rice Research Institute
|
| Street address |
DAPO Box 7777
|
| City |
Metro Manila |
| ZIP/Postal code |
0000 |
| Country |
Philippines |
| |
|
| Platforms (1) |
| GPL892 |
Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA111727 |
Less...
More...