|
Status |
Public on Mar 29, 2008 |
Title |
HIMAC_4022 |
Sample type |
RNA |
|
|
Channel 1 |
Source name |
HIMAC_Control_Replication1
|
Organism |
Oryza sativa |
Characteristics |
Non-irradiated shoots
|
Treatment protocol |
Healthy seedlings, control
|
Growth protocol |
Plants were grown in growth chamber in MS medium for 7 days
|
Extracted molecule |
total RNA |
Extraction protocol |
TRIZOL Reagent method
|
Label |
Cy3
|
Label protocol |
Standard Protocol of Agilent Low RNA Input Fluorescent Linear Amplification Kit
|
|
|
Channel 2 |
Source name |
HIMAC_Treated_Replication1
|
Organism |
Oryza sativa |
Characteristics |
Irradiated shoots
|
Treatment protocol |
Irradiated for 2 h 35 minutes
|
Growth protocol |
Plants were grown in growth chamber in MS medium for 7 days
|
Extracted molecule |
total RNA |
Extraction protocol |
TRIZOL Reagent method
|
Label |
Cy5
|
Label protocol |
Standard Protocol of Agilent Low RNA Input Fluorescent Linear Amplification Kit
|
|
|
|
Hybridization protocol |
Standard protocol of Gene Expression Hybridization Kit from Agilent Technologies
|
Scan protocol |
Standard protocol of Gene Pix Scanner
|
Description |
Keyword = rice Keyword = Irradiation
|
Data processing |
Gene Pix 4000 scanner
|
|
|
Submission date |
Dec 04, 2007 |
Last update date |
Aug 14, 2011 |
Contact name |
Randeep Rakwal |
E-mail(s) |
rakwal-68@aist.go.jp
|
Fax |
+81 29 861 6066
|
Organization name |
AIST
|
Lab |
MST, HTRC lab
|
Street address |
AIST WEST, Onagawa 16-1
|
City |
Tsukuba |
State/province |
Ibaraki |
ZIP/Postal code |
305-8569 |
Country |
Japan |
|
|
Platform ID |
GPL892 |
Series (1) |
GSE9765 |
Microarray analysis of rice plants irradiated with carbon ion beams (HIMAC) |
|