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Items: 1 to 20 of 104

1.

Transcriptional profiles of Salmonella Typhimurium 4/74 parent and relA spoT, rpoS and dksA strains during stationary phase, and RNA polymerase distribution as determined by chromatin immunoprecipitation in parent, relA spoT and dksA strains

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Enteritidis
Type:
Expression profiling by array; Genome binding/occupancy profiling by array
Platforms:
GPL19472 GPL13609
101 Samples
Download data: GPR, TXT
Series
Accession:
GSE63715
ID:
200063715

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

Oxford Gene Technology 4x44K S. Typhimurium SL1344 60-mer oligonucleotide array

(Submitter supplied) Design ID 019399 Protocol: The oligonucleotide array is made up of 4 X 44K 60 mer oligonucleotides printed onto glass slides
Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
2 Series
36 Samples
Download data
Platform
Accession:
GPL19472
ID:
100019472

3.

SALSA 2 IFR Salmonella 8K Arrays

(Submitter supplied) PCR product microarray of ORF's from S. Typhimurium LT2, S. Typhimurium SL1344, S. Typhimurium DT104, S. Enteritidis PT4, and S. Gallinarum 287/91. For the description of PCR amplification and printing procedures see: Clements et al., (2002) PNAS 99(13): 8784-8789; Nagy et al., (2006) Infect. Immun. 74(10):5914-5925
Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
10 Series
163 Samples
Download data
Platform
Accession:
GPL13609
ID:
100013609

4.

ppGpp_R1_OD1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 1_optical density (600 nm) of 1.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556145
ID:
301556145

5.

ppGpp_R1_OD23

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 1_optical density (600 nm) of 2.3 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556144
ID:
301556144

6.

ppGpp_R1_OD30

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 1_optical density (600 nm) of 3.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556143
ID:
301556143

7.

ppGpp_R1_OD42

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 1_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556142
ID:
301556142

8.

ppGpp_R2_OD1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 2_optical density (600 nm) of 1.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556141
ID:
301556141

9.

ppGpp_R2_OD23

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 2_optical density (600 nm) of 2.3 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556140
ID:
301556140

10.

LSP_dksA_PLUS_R3_ChIP

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
SL1344 ΔdksA strain grown to LSP (OD600 = 4.2) and ChIP-chip performed plus antibody. (channel 1) Genomic DNA from S. Typhimurium SL1344 (channel 2)
Platform:
GPL19472
Series:
GSE63711 GSE63715
Download data: GPR
Sample
Accession:
GSM1556075
ID:
301556075

11.

ppGpp_R2_OD30

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 2_optical density (600 nm) of 3.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556139
ID:
301556139

12.

LSP_dksA_PLUS_R2_ChIP

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
SL1344 ΔdksA strain grown to LSP (OD600 = 4.2) and ChIP-chip performed plus antibody. (channel 1) Genomic DNA from S. Typhimurium SL1344 (channel 2)
Platform:
GPL19472
Series:
GSE63711 GSE63715
Download data: GPR
Sample
Accession:
GSM1556074
ID:
301556074

13.

ppGpp_R2_OD42

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 2_optical density (600 nm) of 4.2 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556138
ID:
301556138

14.

LSP_dksA_PLUS_R1_ChIP

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
SL1344 ΔdksA strain grown to LSP (OD600 = 4.2) and ChIP-chip performed plus antibody. (channel 1) Genomic DNA from S. Typhimurium SL1344 (channel 2)
Platform:
GPL19472
Series:
GSE63711 GSE63715
Download data: GPR
Sample
Accession:
GSM1556073
ID:
301556073

15.

ppGpp_R3_OD1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 3_optical density (600 nm) of 1.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556137
ID:
301556137

16.

LSP_dksA_MINUS_R1_ChIP

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
SL1344 ΔdksA strain grown to LSP (OD600 = 4.2) and ChIP-chip performed minus antibody. (channel 1) Genomic DNA from S. Typhimurium SL1344 (channel 2)
Platform:
GPL19472
Series:
GSE63711 GSE63715
Download data: GPR
Sample
Accession:
GSM1556070
ID:
301556070

17.

ppGpp_R3_OD23

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 3_optical density (600 nm) of 2.3 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556136
ID:
301556136

18.

LSP_ppGpp0_PLUS_R3_ChIP

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
SL1344 ΔrelAΔspoT (ppGpp0) strain grown to LSP (OD600 = 4.2) and ChIP-chip performed plus antibody. (channel 1) Genomic DNA from S. Typhimurium SL1344 (channel 2)
Platform:
GPL19472
Series:
GSE63711 GSE63715
Download data: GPR
Sample
Accession:
GSM1556069
ID:
301556069

19.

ppGpp_R3_OD30

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
S. Typhimurium ΔrelAΔspoT. Biol. Rep. 3_optical density (600 nm) of 3.0 (channel 1) S. Typhimurium SL1344 genomic DNA (channel 2)
Platform:
GPL13609
Series:
GSE63714 GSE63715
Download data: GPR
Sample
Accession:
GSM1556135
ID:
301556135

20.

LSP_ppGpp0_PLUS_R2_ChIP

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Source name:
SL1344 ΔrelAΔspoT (ppGpp0) strain grown to LSP (OD600 = 4.2) and ChIP-chip performed plus antibody. (channel 1) Genomic DNA from S. Typhimurium SL1344 (channel 2)
Platform:
GPL19472
Series:
GSE63711 GSE63715
Download data: GPR
Sample
Accession:
GSM1556068
ID:
301556068

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