GEO help: Mouse over screen elements for information.
Status
Public on Jun 30, 2007
Title
Sentrix MouseRef-8 Expression BeadChip (Target ID)
Technology type
oligonucleotide beads
Distribution
custom-commercial
Organism
Mus musculus Manufacturer
Illumina Inc.
Manufacture protocol
http://www.illumina.com/technology/platform/tech_plat_arraymfg.ilmn
Description
The Sentrix MouseRef-8 BeadChip can be used to study expression of approximately 24,000 well-annotated transcripts from the NCBI RefSeq database. Researchers can generate whole-genome expression profiles for 8 samples in parallel on a single BeadChip. The array is composed of 3 micron features with average feature redundancy of 30-fold. All features are quality controlled by sequential hybridizations process called array decoding. Probes are fully screened, full-length 50-mers. Assay requires 50-100ng of total RNA input.
Contributor(s)
Zhong W Submission date
Feb 13, 2007
Last update date
Jan 18, 2013
Organization
Illumina Inc.
E-mail(s)
expression@illumina.com, techsupport@illumina.com Phone
1 800 809 4566
URL
http://www.illumina.com Street address
9885 Towne Centre Drive
City
San Diego
State/province
CA
ZIP/Postal code
92121
Country
USA
Samples (128)
GSM101285 , GSM101286 , GSM101287 , GSM101288 , GSM101289 , GSM101290
GSM101291 ,
GSM101292 ,
GSM101293 ,
GSM101294 ,
GSM101295 ,
GSM101296 ,
GSM101297 ,
GSM101298 ,
GSM104061 ,
GSM104062 ,
GSM104063 ,
GSM104064 ,
GSM104065 ,
GSM104066 ,
GSM104067 ,
GSM104068 ,
GSM104069 ,
GSM104070 ,
GSM124768 ,
GSM124769 ,
GSM124770 ,
GSM124771 ,
GSM172475 ,
GSM172476 ,
GSM172477 ,
GSM172478 ,
GSM172479 ,
GSM172480 ,
GSM172481 ,
GSM174553 ,
GSM174554 ,
GSM174555 ,
GSM174556 ,
GSM174557 ,
GSM174570 ,
GSM174571 ,
GSM174572 ,
GSM174573 ,
GSM220148 ,
GSM220149 ,
GSM220150 ,
GSM220151 ,
GSM264911 ,
GSM264919 ,
GSM264923 ,
GSM264927 ,
GSM264934 ,
GSM264937 ,
GSM264940 ,
GSM264942 ,
GSM303439 ,
GSM303440 ,
GSM303441 ,
GSM303442 ,
GSM303443 ,
GSM303444 ,
GSM303445 ,
GSM303446 ,
GSM303447 ,
GSM303448 ,
GSM303449 ,
GSM303450 ,
GSM303451 ,
GSM303452 ,
GSM303453 ,
GSM303454 ,
GSM303455 ,
GSM303456 ,
GSM303457 ,
GSM303458 ,
GSM303459 ,
GSM303460 ,
GSM303461 ,
GSM303462 ,
GSM303463 ,
GSM303464 ,
GSM303465 ,
GSM303466 ,
GSM303467 ,
GSM303468 ,
GSM303469 ,
GSM303470 ,
GSM303471 ,
GSM303472 ,
GSM303473 ,
GSM303474 ,
GSM303475 ,
GSM303476 ,
GSM303477 ,
GSM303478 ,
GSM303479 ,
GSM303480 ,
GSM303481 ,
GSM303482 ,
GSM303483 ,
GSM303484 ,
GSM303485 ,
GSM303486 ,
GSM433817 ,
GSM433818 ,
GSM433819 ,
GSM433820 ,
GSM433821 ,
GSM433822 ,
GSM433823 ,
GSM433824 ,
GSM433825 ,
GSM433826 ,
GSM433827 ,
GSM433828 ,
GSM433829 ,
GSM433830 ,
GSM433831 ,
GSM433832 ,
GSM433833 ,
GSM433834 ,
GSM433835 ,
GSM433836 ,
GSM433837 ,
GSM433838 ,
GSM433839 ,
GSM433840 Series (13)
GSE4522 MicroRNA-134 Modulates Mouse Embryonic Stem Cell Differentiation
GSE5435 FGF2 stimulation experiment with CD1 mouse embryonic fibroblasts
GSE5436 FGF2 stimulation experiment with NMRI mouse embryonic fibroblasts
GSE7162 Expression data from Mus musculus Myc-null heart at E13.5
GSE7238 Ets2 is required for trophoblast stem cell self renewal
GSE8711 Knock-in of Kras G12D in mouse MLP-29 cells
GSE10504 Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells
GSE11996 Gas7 male transgenic liver expression vs FVB male wildtype control
GSE11997 Gpx3 male transgenic liver expression vs B6/DBA male wildtype control
GSE11998 Gyk female heterozygous liver expression vs C57Bl/6J female wildtype control
GSE11999 Lactb male transgenic liver expression vs FVB male wildtype control
GSE12000 Obesity study in transgenic and knockout animals
GSE17355 Regulatory T cell-mediated resolution of lung injury: Identification of potential target genes via expression profiling
Data table header descriptions ID GB_ACC GenBank accession number
SYMBOL Gene symbol
TYPE A = oligo matches all known splice isoforms; I = isoform-specific oligo; S = oligo specifies single known splice form
GENE_NAME SEQUENCE Specific stretch of oligonucleotide sequence
SPOT_ID spot identifier
Data table ID GB_ACC SYMBOL TYPE GENE_NAME SEQUENCE SPOT_ID 18S_rRNA_X00686_523-S
NM_133779 Pigt
S
Mus musculus phosphatidylinositol glycan, class T (Pigt), mRNA.
CAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATCCTT
GI_11079652-S
NM_008478 L1cam
S
Mus musculus L1 cell adhesion molecule (L1cam), mRNA.
CAGTGGCAAGAAAGAGAAGGAGGCAGCAGGAGGCAATGACAGTTCAGGGG
gi_21070949_ref_NM_019639.2__151-S
XM_147315 Ubc
S
Mus musculus ubiquitin C (Ubc), mRNA.
CCGCACCCTGTCAGACTACAACATCCAGAAAGAGTCCACCCTGCACCTGG
gi_21070949_ref_NM_019639.2__531-S
XM_147315 Ubc
S
Mus musculus ubiquitin C (Ubc), mRNA.
CCTTCCTCACCACAGTATCTAAAAAGAGCCCTCCTTGTGCTTGTTCTTGG
GI_21070949-S
NM_019639 Ubc
S
Mus musculus ubiquitin C (Ubc), mRNA.
GACAGACGTACCTTCCTCACCACAGTATCTAAAAAGAGCCCTCCTTGTGC
GI_21746160-S
NM_023716 2410129E14Rik
S
Mus musculus RIKEN cDNA 2410129E14 gene (2410129E14Rik), mRNA.
AGGTTTGTGCTGGGTCTCTGGTGCTCTTCACTGTTGCCTGTCACTTTTTT
GI_23346428-S
NM_008665 Myt1
S
Mus musculus myelin transcription factor 1 (Myt1), mRNA.
TGGCCAAGCTGCCCAGGATCTTGATACCCCAATACTGTGACCCTCCTTCC
GI_23592945-S
XM_134967 Eef1a1
S
Mus musculus eukaryotic translation elongation factor 1 alpha 1 (Eef1a1), mRNA.
GCAAGCCCATGTGTGTTGAGAGCTTCTCTGACTACCCTCCACTTGGTCGC
GI_23956057-S
NM_011123 Plp
S
Mus musculus proteolipid protein (myelin) (Plp), mRNA.
TGGGCCAATATATAAGGTAAACAAGCAGGATGCACAAGAGTGAGGAGAGC
GI_28476905-S
XM_133123 3010033P07Rik
S
Mus musculus RIKEN cDNA 3010033P07 gene (3010033P07Rik), mRNA.
CCCCGGCGTCTGTTTGAAGGCAATGCTCTCCTGCGGCGGCTTGTTCGCAT
gi_30794511_ref_NM_013551.1__496-S
NM_013551 Hmbs
S
Mus musculus hydroxymethylbilane synthase (Hmbs), mRNA.
CCACTAATAAACCAGTTTAGAATGTGGTTCTTCTGATAGAGTTGGGGAAG
GI_31981441-S
NM_011660 Txn1
S
Mus musculus thioredoxin 1 (Txn1), mRNA.
CTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACAT
gi_31981889_ref_NM_009735.2__43-S
NM_009735 B2m
S
Mus musculus beta-2 microglobulin (B2m), mRNA.
CACCCCCACTGAGACTGATACATACGCCTGCAGAGTTAAGCATGCCAGTA
GI_31982339-S
NM_008119 Gip
S
Mus musculus gastric inhibitory polypeptide (Gip), mRNA.
GGGGGAAGAAGAGTGACTGGAAACACAACATCACCCAGAGAGAGGCCCGG
gi_32129296_ref_NM_009438.3__526-S
NM_009438 Rpl13a
S
Mus musculus ribosomal protein L13a (Rpl13a), mRNA.
CTGTGGATAGAGGGGACATTAGAGAGCTGACAGCGCACCACCTGCATGAG
GI_46909570-S
NM_010258 Gata6
S
Mus musculus GATA binding protein 6 (Gata6), mRNA.
GTATCTGTAACACTCTTGACGCCTGTACCACGTGACCAACCCACAGGTTG
gi_6671508_ref_NM_007393.1__400-S
NM_007393 Actb
S
Mus musculus actin, beta, cytoplasmic (Actb), mRNA.
CTTCATTTTTGTTTTTAATTTCTGAATGGCCCAGGTCTGAGGCCTCCCTT
GI_6671508-S
NM_007393 Actb
S
Mus musculus actin, beta, cytoplasmic (Actb), mRNA.
TCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGGTGACAGCATTGCTTCT
GI_6678306-S
NM_009362 Tff1
S
Mus musculus trefoil factor 1 (Tff1), mRNA.
ACACACCTATTCTGTGGCTGGATCTGGCTGGTGACACAGTTCAACCCCTC
gi_6679936_ref_NM_008084.1__328-S
NM_008084 S
CCTGGTATGACAATGAATACGGCTACAGCAACAGGGTGGTGGACCTCATG
24048 3481 Kbytes .Supplementary data files not provided
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