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Items: 10

1.

Transcriptional profiles of Salmonella Typhimurium 4/74 parent and relA spoT, rpoS and dksA strains during stationary phase, and RNA polymerase distribution as determined by chromatin immunoprecipitation in parent, relA spoT and dksA strains

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Type:
Expression profiling by array; Genome binding/occupancy profiling by array
Platforms:
GPL19472 GPL13609
101 Samples
Download data: GPR, TXT
Series
Accession:
GSE63715
ID:
200063715

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

Transcriptomic profiles of S. Typhimurium SL1344 parent strain and ΔrpoS and ΔrelAΔspoT and ΔrelAΔspoTΔrpoS mutant strains grown to various optical densities during late-log and stationary phase in LB aerobic batch culture

(Submitter supplied) S. Typhimurium SL1344 parental strain and isogenic ΔrpoS, ΔrelAΔspoT and ΔrelAΔspoTΔrpoS strains were grown to OD600=1.0, OD600=2.3, OD600=3.0 and OD600=4.2 in Luria-Bertani medium.
Organism:
Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Type:
Expression profiling by array
Platform:
GPL13609
35 Samples
Download data: GPR
Series
Accession:
GSE63714
ID:
200063714

PubMed Full text in PMC Similar studies Analyze with GEO2R

3.

Transcriptomic profiles of S. Typhimurium SL1344 parent strain and ΔdksA and ΔrelAΔspoTΔdksA mutant strains grown to various optical densities during late-log and stationary phase in LB aerobic batch culture

(Submitter supplied) S. Typhimurium SL1344 parental strain and isogenic ΔrpoS, ΔdksA and ΔrelAΔspoT, ΔrelAΔspoTΔrpoS and ΔrelAΔspoTΔdksA strains were grown to OD600=1.0, OD600=2.3, OD600=3.0 and OD600=4.2 in Luria-Bertani medium.
Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Type:
Expression profiling by array
Platform:
GPL13609
30 Samples
Download data: TXT
Series
Accession:
GSE63713
ID:
200063713

PubMed Full text in PMC Similar studies Analyze with GEO2R

4.

Effect of cortisol on S. Typhimurium parental strain and an isogenic scsA mutant

(Submitter supplied) S. Typhimurium 112910a parental strain and an isogenic ΔscsA strain were grown to stationary phase in SPI2 inducing minimal medium (MM5.8 - Erikkson et al., 2006 Inf & Imm., 74:1243) with or without supplementation with 1µM cortisol
Organism:
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Type:
Expression profiling by array
Platform:
GPL13609
12 Samples
Download data: GPR
Series
Accession:
GSE55430
ID:
200055430

PubMed Full text in PMC Similar studies Analyze with GEO2R

5.

Salmonella Typhimurium: Wild type SL1344 Vs. ∆relA, ∆spoT (ppGpp0) strain grown under SPI1-inducing conditions

(Submitter supplied) Transcriptional profiling of early stationary phase S. Typhimurium, comparing wild type SL1344 with an isogenic ∆relA,∆spoT strain (JH3370).
Organism:
Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium
Type:
Expression profiling by array
Platform:
GPL13609
7 Samples
Download data: TXT
Series
Accession:
GSE34269
ID:
200034269

Analyze with GEO2R

6.

Salmonella Typhimurium: Immobilized growth vs. Planktonic growth

(Submitter supplied) Transcriptional profiling of four growth phases S. Typhimurium comparing immobilised growth with planktonic growth.
Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Type:
Expression profiling by array
Platform:
GPL13609
37 Samples
Download data: TXT
Series
Accession:
GSE32995
ID:
200032995

PubMed Similar studies Analyze with GEO2R

7.

Salmonella Typhimurium: control vs. T2 toxin treatment

(Submitter supplied) Transcriptional profiling of log and stationary phases of S. Typhimurium, comparing untreated controls with T2 toxin-treated samples.
Organism:
Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Type:
Expression profiling by array
Platform:
GPL13609
12 Samples
Download data: TXT
Series
Accession:
GSE30925
ID:
200030925

Analyze with GEO2R

8.

Salmonella Typhimurium: wild type vs. ∆scsA mutant

(Submitter supplied) Transcriptional profiling of log and stationary phases of S. Typhimurium, comparing wild type with the ∆scsA strain.
Organism:
Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Type:
Expression profiling by array
Platform:
GPL13609
12 Samples
Download data: TXT
Series
Accession:
GSE30924
ID:
200030924

PubMed Full text in PMC Similar studies Analyze with GEO2R

9.

Salmonella Typhimurium: control vs. cortisol treatment

(Submitter supplied) Transcriptional profiling of log and stationary phases of S. Typhimurium, comparing untreated controls with cortisol-treated samples.
Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Typhimurium; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Type:
Expression profiling by array
Platform:
GPL13609
12 Samples
Download data: TXT
Series
Accession:
GSE30923
ID:
200030923

PubMed Full text in PMC Similar studies Analyze with GEO2R

10.

Salmonella Typhimurium: control vs. Deoxynivalenol (DON) treatment

(Submitter supplied) Transcriptional profiling of log and stationary phase S. Typhimurium, comparing untreated controls with Deoxynivalenol treated samples.
Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Typhimurium; Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
Type:
Expression profiling by array
Platform:
GPL13609
12 Samples
Download data: TXT
Series
Accession:
GSE29399
ID:
200029399

Analyze with GEO2R

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